RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 C11orf44Q8N8P7 122 aa13.78□□□□□ -0.2
LST1-220ENST00000464526 OR2T6Q8NHC8 308 aa13.78□□□□□ -0.2
LST1-220ENST00000464526 SRSF12Q8WXF0 261 aaKnown RBP13.78□□□□□ -0.2
LST1-220ENST00000464526 ARPC1AQ92747 370 aa13.78□□□□□ -0.2
LST1-220ENST00000464526 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
LST1-220ENST00000464526 SOX15O60248 233 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 HLA-GP17693 338 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 COMPP49747 757 aaPredicted RBP13.77□□□□□ -0.21
LST1-220ENST00000464526 DEFA5Q01523 94 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 RGS21Q2M5E4 152 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 C19orf54Q5BKX5 351 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.21
LST1-220ENST00000464526 ZNF562Q6V9R5 426 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 H2BFWTQ7Z2G1 175 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 KLHDC1Q8N7A1 406 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 ABHD5Q8WTS1 349 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 WNT10AQ9GZT5 417 aa13.77□□□□□ -0.21
LST1-220ENST00000464526 ALX4Q9H161 411 aaPredicted RBP13.77□□□□□ -0.21
LST1-220ENST00000464526 TMEM89A2RUT3 159 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 C15orf61A6NNL5 157 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 TEX22C9J3V5 150 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 DUS4LO95620 317 aaKnown RBP13.76□□□□□ -0.21
LST1-220ENST00000464526 OXA1LQ15070 435 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 LGI3Q8N145 548 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 STPG2Q8N412 459 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 LFNGQ8NES3 379 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 OR10W1Q8NGF6 305 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 OR4F5Q8NH21 305 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 WIPF2Q8TF74 440 aaPredicted RBP13.76□□□□□ -0.21
LST1-220ENST00000464526 MITD1Q8WV92 249 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 CACNG5Q9UF02 275 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 RNF114Q9Y508 228 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 CLPSL1A2RUU4 121 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 B3GALNT1O75752 331 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 CNIH1O95406 144 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 ANXA3P12429 323 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 AREGP15514 252 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 CFHR3Q02985 330 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 MMD2Q8IY49 270 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 LRTM2Q8N967 370 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 RNASE11Q8TAA1 199 aaKnown RBP13.76□□□□□ -0.21
LST1-220ENST00000464526 VSTM2AQ8TAG5 236 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 ZNF431Q8TF32 576 aaPredicted RBP13.76□□□□□ -0.21
LST1-220ENST00000464526 MMP24Q9Y5R2 645 aa13.76□□□□□ -0.21
LST1-220ENST00000464526 VWFP04275 2813 aa13.75□□□□□ -0.21
LST1-220ENST00000464526 A0A0B4J2A0 478 aa13.75□□□□□ -0.21
LST1-220ENST00000464526 MSGN1A6NI15 193 aa13.75□□□□□ -0.21
LST1-220ENST00000464526 REG1AP05451 166 aa13.75□□□□□ -0.21
LST1-220ENST00000464526 TCTEX1D4Q5JR98 221 aa13.75□□□□□ -0.21
LST1-220ENST00000464526 GGNBP1Q5YKI7 109 aa13.75□□□□□ -0.21
LST1-220ENST00000464526 FYTTD1Q96QD9 318 aaKnown RBP13.75□□□□□ -0.21
LST1-220ENST00000464526 TMEM14BQ9NUH8 114 aa13.75□□□□□ -0.21
LST1-220ENST00000464526 SHPKQ9UHJ6 478 aa13.75□□□□□ -0.21
LST1-220ENST00000464526 TEX50A0A1B0GTY4 177 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 RBMXL2O75526 392 aaKnown RBP13.74□□□□□ -0.21
LST1-220ENST00000464526 IGF1P05019 195 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 TATDN3Q17R31 274 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 UXS1Q8NBZ7 420 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 WFDC12Q8WWY7 111 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 IL22RA2Q969J5 263 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 OR51B2Q9Y5P1 312 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 AP4M1O00189 453 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 ST8SIA3O43173 380 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 PRH1P02810 166 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 IL5P05113 134 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 RPL27AP46776 148 aaKnown RBP13.74□□□□□ -0.21
LST1-220ENST00000464526 OR4A5Q8NH83 315 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 SGMS2Q8NHU3 365 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 RRNAD1Q96FB5 475 aaKnown RBP13.74□□□□□ -0.21
LST1-220ENST00000464526 WDR89Q96FK6 387 aaPredicted RBP13.74□□□□□ -0.21
LST1-220ENST00000464526 HINT2Q9BX68 163 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 ALG5Q9Y673 324 aa13.74□□□□□ -0.21
LST1-220ENST00000464526 TRAV41A0A0B4J266 112 aa13.73□□□□□ -0.21
LST1-220ENST00000464526 VDAC1P21796 283 aa13.73□□□□□ -0.21
LST1-220ENST00000464526 PPIFP30405 207 aaKnown RBP13.73□□□□□ -0.21
LST1-220ENST00000464526 TMEM158Q8WZ71 300 aa13.73□□□□□ -0.21
LST1-220ENST00000464526 OR10C1Q96KK4 312 aa13.73□□□□□ -0.21
LST1-220ENST00000464526 FOXA2Q9Y261 457 aaPredicted RBP13.73□□□□□ -0.21
LST1-220ENST00000464526 A0A1W2PN81 502 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 IGLC7A0M8Q6 106 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 KCNAB3O43448 404 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 CHRNA7P36544 502 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 WT1-ASQ06250 92 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 UNQ5815/PRO19632Q6UWF5 114 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 FOXRED2Q8IWF2 684 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 OR5T1Q8NG75 326 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 OR4A16Q8NH70 328 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 LSM10Q969L4 123 aaKnown RBP13.72□□□□□ -0.21
LST1-220ENST00000464526 KLK15Q9H2R5 256 aa13.72□□□□□ -0.21
LST1-220ENST00000464526 ACTL6BO94805 426 aa13.71□□□□□ -0.21
LST1-220ENST00000464526 CD28P10747 220 aa13.71□□□□□ -0.21
LST1-220ENST00000464526 CRIP2P52943 208 aaPredicted RBP13.71□□□□□ -0.21
LST1-220ENST00000464526 SRPXP78539 464 aa13.71□□□□□ -0.21
LST1-220ENST00000464526 C12orf45Q8N5I9 185 aaPredicted RBP13.71□□□□□ -0.21
LST1-220ENST00000464526 COQ8AQ8NI60 647 aa13.71□□□□□ -0.21
LST1-220ENST00000464526 CHPT1Q8WUD6 406 aa13.71□□□□□ -0.21
LST1-220ENST00000464526 NDUFA4L2Q9NRX3 87 aa13.71□□□□□ -0.21
LST1-220ENST00000464526 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
LST1-220ENST00000464526 CMYA5Q8N3K9 4069 aa13.71□□□□□ -0.21
LST1-220ENST00000464526 C7orf66A4D0T2 115 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms