RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RALYQ9UKM9 306 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-216ENST00000464275 NBASA2RRP1 2371 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 TRAV3A0A0B4J244 114 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 C11orf71Q6IPW1 123 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 FAM71F2Q6NXP2 309 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 TAF15Q92804 592 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 RCC1LQ96I51 464 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 TMEM147Q9BVK8 224 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 ZNRD1Q9P1U0 126 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 VAX2Q9UIW0 290 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 HIVEP3Q5T1R4 2406 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 A0A087X0M5 115 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 A0A1B0GX30 115 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 MBP02144 154 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 GNB2P62879 340 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 RPP30P78346 268 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 OR4A47Q6IF82 309 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 OR13D1Q8NGV5 346 aa17.75■□□□□ 0.43
PDLIM2-216ENST00000464275 C15orf61A6NNL5 157 aa17.74■□□□□ 0.43
PDLIM2-216ENST00000464275 J3QR06 171 aa17.74■□□□□ 0.43
PDLIM2-216ENST00000464275 RBMS3Q6XE24 437 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-216ENST00000464275 UBE2L5PA0A1B0GUS4 154 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 CEBPGP53567 150 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 ELOBQ15370 118 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 FAM90A2PQ658T7 463 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 NEU4Q8WWR8 484 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 ITLN2Q8WWU7 325 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 FOXA2Q9Y261 457 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 ABCA4P78363 2273 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 ADGRG4Q8IZF6 3080 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 C15orf62A8K5M9 175 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 APOA2P02652 100 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 IGHV1-8P0DP01 117 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 GNLYP22749 145 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 VDAC2P45880 294 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 ZNF841Q6ZN19 808 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 TMEM186Q96B77 213 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 TCF19Q9Y242 345 aa17.73■□□□□ 0.43
PDLIM2-216ENST00000464275 B2MP61769 119 aa17.72■□□□□ 0.43
PDLIM2-216ENST00000464275 ZNF726P1Q15940 193 aa17.72■□□□□ 0.43
PDLIM2-216ENST00000464275 OR10X1Q8NGY0 326 aa17.72■□□□□ 0.43
PDLIM2-216ENST00000464275 OR9G1Q8NH87 305 aa17.72■□□□□ 0.43
PDLIM2-216ENST00000464275 MRPL20Q9BYC9 149 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-216ENST00000464275 TMPRSS5Q9H3S3 457 aa17.72■□□□□ 0.43
PDLIM2-216ENST00000464275 TMEM14BQ9NUH8 114 aa17.72■□□□□ 0.43
PDLIM2-216ENST00000464275 CACNA1AO00555 2505 aa17.72■□□□□ 0.43
PDLIM2-216ENST00000464275 MAP1LC3B2A6NCE7 125 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 SOX15O60248 233 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 IL6RP08887 468 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 RPS10P46783 165 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 UQCRFS1P47985 274 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 RAB11AP62491 216 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 VWC2Q2TAL6 325 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 MAP1LC3BQ9GZQ8 125 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 CTDSP1Q9GZU7 261 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 HEYLQ9NQ87 328 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 RND2P52198 227 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 HSPE1P61604 102 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 DTX2Q86UW9 622 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 C11orf42Q8N5U0 333 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 OSR1Q8TAX0 266 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 MIOXQ9UGB7 285 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 ZZEF1O43149 2961 aa17.71■□□□□ 0.43
PDLIM2-216ENST00000464275 NBEAQ8NFP9 2946 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 ZFP92A6NM28 416 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 SOD3P08294 240 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 ZNF137PP52743 207 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 LCN15Q6UWW0 184 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 OR5AN1Q8NGI8 311 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 RAB1CQ92928 201 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 TMEM133Q9H2Q1 129 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 PRNDQ9UKY0 176 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 IFNA10P01566 189 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 FBP1P09467 338 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 KIAA0141Q14154 515 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 ABHD12Q8N2K0 398 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 OR8B3Q8NGG8 313 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 Q8WTZ3 238 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 TIMD4Q96H15 378 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 OR8B2Q96RD0 313 aa17.7■□□□□ 0.42
PDLIM2-216ENST00000464275 H0YJW9 148 aa17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 CLDN34H7C241 214 aa17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 UPK2O00526 184 aa17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 IGKV1-16P04430 117 aa17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 RPS16P62249 146 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 ST6GALNAC6Q969X2 333 aa17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 NEIL1Q96FI4 390 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 VSIRQ9H7M9 311 aa17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 SLC39A9Q9NUM3 307 aa17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 BET1LQ9NYM9 111 aa17.69■□□□□ 0.42
PDLIM2-216ENST00000464275 CTXND1A0A1B0GTU2 59 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 IL3RAP26951 378 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 TMEM177Q53S58 311 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 C8orf46Q8TAG6 207 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 TNFRSF14Q92956 283 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 NABP2Q9BQ15 211 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 SDF2L1Q9HCN8 221 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 KALRNO60229 2985 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 ZNF727A8MUV8 499 aa17.68■□□□□ 0.42
PDLIM2-216ENST00000464275 HOXA5P20719 270 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms