RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 SRSF7Q16629 238 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 RNASEH2CQ8TDP1 164 aaKnown RBP11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 CHODLQ9H9P2 273 aa11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 CELA3BP08861 270 aa11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 BTCP35070 178 aa11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 SBF1O95248 1867 aa11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 AGAP20933 346 aa11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 DLX1P56177 255 aa11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 SPRR3Q9UBC9 169 aa11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 PLXNA3P51805 1871 aa11.33□□□□□ -0.6
CHRNA4-202ENST00000463705 MPTX1A8MV57 137 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 CRYGSP22914 178 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 ANOS1P23352 680 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 ZNF383Q8NA42 475 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 CACNG8Q8WXS5 425 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 ATG101Q9BSB4 218 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 C17orf98A8MV24 154 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 CX3CL1P78423 397 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 SAPCD1Q5SSQ6 148 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 C18orf12Q96KH6 178 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 PARLQ9H300 379 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 CBY1Q9Y3M2 126 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 IGKV1-9A0A0C4DH69 117 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 SIAH2O43255 324 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 SNRPCP09234 159 aaKnown RBP11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 CRYBB3P26998 211 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 SDK2Q58EX2 2172 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 IFITM10A6NMD0 228 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 E9PLN8 166 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 CKS2P33552 79 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 LY6EQ16553 131 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 VKORC1Q9BQB6 163 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 VWA8A3KMH1 1905 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 MSGN1A6NI15 193 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 IL18BPO95998 194 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 CLPSP04118 112 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 RELBQ01201 579 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 OR1P1Q8NH06 330 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 PLPPR1Q8TBJ4 325 aa11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 MRPL18Q9H0U6 180 aaKnown RBP11.32□□□□□ -0.6
CHRNA4-202ENST00000463705 GVINP1Q7Z2Y8 2422 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 PINLYPA6NC86 204 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 FHITP49789 147 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 EFNA2O43921 213 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 TFPI2P48307 235 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 LINC00305Q7Z4B0 112 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 EAF1Q96JC9 268 aaPredicted RBP11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 MAP1LC3AQ9H492 121 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 TRGC2P03986 189 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 IL4P05112 153 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 OR10S1Q8NGN2 331 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 DDB2Q92466 427 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 ARHGEF17Q96PE2 2063 aaPredicted RBP11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 MOSP00540 346 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 WDR82Q6UXN9 313 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 ZNF319Q9P2F9 582 aa11.31□□□□□ -0.6
CHRNA4-202ENST00000463705 FAM90A9PA6NNJ1 464 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 TIMP3P35625 211 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 DLX6P56179 175 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 SNRPD3P62318 126 aaKnown RBP11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 FAM53AQ6NSI3 398 aaPredicted RBP11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 GGNQ86UU5 652 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 ZIC4Q8N9L1 334 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 VN1R17PQ8TDU5 208 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 FAM168AQ92567 244 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 RCC1LQ96I51 464 aaKnown RBP11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 GFI1Q99684 422 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 MRPL20Q9BYC9 149 aaKnown RBP11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 MDKP21741 143 aaPredicted RBP11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 A0A0G2JLM5 398 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 RBFOX2O43251 390 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 IGHV1-18A0A0C4DH31 117 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 PROB1E7EW31 1015 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 PSMB2P49721 201 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 RRN3P1Q2M238 152 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 PHLDA3Q9Y5J5 127 aa11.3□□□□□ -0.6
CHRNA4-202ENST00000463705 LOC389332A0A1B0GUA5 103 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 MBNL2Q5VZF2 373 aaKnown RBP11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 ARPC1AQ92747 370 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 TBX15Q96SF7 602 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 DCAF16Q9NXF7 216 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 CARHSP1Q9Y2V2 147 aaKnown RBP11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 TGIF2-C20orf24A0A0A6YYL0 155 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 CLDND2Q8NHS1 167 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 SRSF12Q8WXF0 261 aaKnown RBP11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 DCTN5Q9BTE1 182 aa11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 COL25A1Q9BXS0 654 aaPredicted RBP11.29□□□□□ -0.6
CHRNA4-202ENST00000463705 EIF3GO75821 320 aaKnown RBP eCLIP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms