RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 CHD5Q8TDI0 1954 aa2.03□□□□□ -2.08
GPNMB-205ENST00000463011 REREQ9P2R6 1566 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 NUP160Q12769 1436 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 NUP155O75694 1391 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 COL1A2P08123 1366 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 ROBO3Q96MS0 1386 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 NUP205Q92621 2012 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 IGKV1D-17A0A075B6S4 117 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 IGHV3-15A0A0B4J1V0 119 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 H3BPC8 53 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 PIRO00625 290 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 NPYP01303 97 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 IGKV1-17P01599 117 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 CTSGP08311 255 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 CYBAP13498 195 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 BLVRBP30043 206 aaPredicted RBP2.02□□□□□ -2.09
GPNMB-205ENST00000463011 DEFA3P59666 94 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 POLR2GP62487 172 aaKnown RBP eCLIP2.02□□□□□ -2.09
GPNMB-205ENST00000463011 HBA1P69905 142 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 KRR1Q13601 381 aaKnown RBP2.02□□□□□ -2.09
GPNMB-205ENST00000463011 TEX36Q5VZQ5 186 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 LYG2Q86SG7 212 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 GDPD1Q8N9F7 314 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 ACOT12Q8WYK0 555 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 TVP23CQ96ET8 276 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 KLF6Q99612 283 aaPredicted RBP2.02□□□□□ -2.09
GPNMB-205ENST00000463011 PKMYT1Q99640 499 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 PRRT1Q99946 306 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 HOPXQ9BPY8 73 aaPredicted RBP2.02□□□□□ -2.09
GPNMB-205ENST00000463011 AICDAQ9GZX7 198 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 ATPIF1Q9UII2 106 aa2.02□□□□□ -2.09
GPNMB-205ENST00000463011 SHANK3Q9BYB0 1731 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 IGLV10-54A0A075B6I4 117 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 A0A0J9YX75 114 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 EXOC1LA0A1B0GW35 172 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 A0A1W2PQD3 144 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 GGT3PA6NGU5 568 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 C11orf86A6NJI1 115 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 G3V3Q6 166 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 LEPROTO15243 131 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 SERPINE1P05121 402 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 BPGMP07738 259 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 CA5AP35218 305 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 FXYD7P58549 80 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 AP1S1P61966 158 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 C12orf74Q32Q52 190 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 TMED4Q7Z7H5 227 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 LINC00304Q8N9R0 145 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 NEK7Q8TDX7 302 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 SMCR5Q8TEV8 140 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 NIPSNAP1Q9BPW8 284 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 TP73-AS1Q9UF72 201 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 TMEM56-RWDD3S4R434 201 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 HECW1Q76N89 1606 aa2.01□□□□□ -2.09
GPNMB-205ENST00000463011 ZNF532Q9HCE3 1301 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 hCG_1818297A0A087WSY0 165 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 IGKV1D-43A0A0B4J1Z2 117 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 TMEM235A6NFC5 223 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 DPRXA6NFQ7 191 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 A8MT66 165 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 FABP1P07148 127 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 TFPTP0C1Z6 253 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 HLA-DMBP28068 263 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 B2MP61769 119 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 TMPPEQ6ZT21 453 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 SLC36A1Q7Z2H8 476 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 CCDC90BQ9GZT6 254 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 IL36BQ9NZH7 164 aa2□□□□□ -2.09
GPNMB-205ENST00000463011 RBM7Q9Y580 266 aaKnown RBP2□□□□□ -2.09
GPNMB-205ENST00000463011 TRAV9-1A0A075B6T8 112 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HMGB3O15347 200 aaKnown RBP1.99□□□□□ -2.09
GPNMB-205ENST00000463011 GNRH2O43555 120 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 KLRC4O43908 158 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 ZNF682O95780 498 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 IGKV1-5P01602 117 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 PRM2P04554 102 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 ZNF728P0DKX0 622 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST1H2BOP23527 126 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST1H2BBP33778 126 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 CCR2P41597 374 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST1H2BDP58876 126 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST1H2BCP62807 126 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 CCL20P78556 96 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 AKR1C1Q04828 323 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 MIAQ16674 131 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST2H2BEQ16778 126 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 ARHGAP11BQ3KRB8 267 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.99□□□□□ -2.09
GPNMB-205ENST00000463011 C9orf64Q5T6V5 341 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 AADACL3Q5VUY0 350 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 OR4C16Q8NGL9 310 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 GNPDA2Q8TDQ7 276 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST1H2BHQ93079 126 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 IMMP2LQ96T52 175 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST1H2BNQ99877 126 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 HIST1H2BMQ99879 126 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 OR8D2Q9GZM6 311 aa1.99□□□□□ -2.09
GPNMB-205ENST00000463011 VCX3BQ9H321 246 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms