RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CA2P00918 260 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 HSPE1P61604 102 aaKnown RBP13.92□□□□□ -0.18
ACTB-207ENST00000462494 FAM78BQ5VT40 261 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 STUMQ69YW2 141 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 KCNIP4Q6PIL6 250 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 TMEM183AQ8IXX5 376 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 FAM222BQ8WU58 562 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 TMEM37Q8WXS4 190 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 SNRNP40Q96DI7 357 aaKnown RBP13.92□□□□□ -0.18
ACTB-207ENST00000462494 C1orf159Q96HA4 380 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 GAFA1Q96PS6 74 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 IL19Q9UHD0 177 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 FUT9Q9Y231 359 aa13.92□□□□□ -0.18
ACTB-207ENST00000462494 F6UZH7 168 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 MMP23AO75900 390 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 IL6RP08887 468 aaPredicted RBP13.91□□□□□ -0.18
ACTB-207ENST00000462494 C1QTNF9P0C862 333 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 STAG3L2P0CL84 134 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 STAG3L3P0CL85 134 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 HNF1AP20823 631 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 COL8A2P25067 703 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 SRP14P37108 136 aaKnown RBP13.91□□□□□ -0.18
ACTB-207ENST00000462494 GATA4P43694 442 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 TEPPQ6URK8 271 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 IGFL3Q6UXB1 125 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 TCF23Q7RTU1 214 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 ZNF114Q8NC26 417 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 DCAF16Q9NXF7 216 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 IDI2-AS1Q9NZ38 188 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 ZNRD1Q9P1U0 126 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 FOXA2Q9Y261 457 aaPredicted RBP13.91□□□□□ -0.18
ACTB-207ENST00000462494 YLPM1P49750 1951 aaKnown RBP13.91□□□□□ -0.18
ACTB-207ENST00000462494 PLCE1Q9P212 2302 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 ITGB1BP1O14713 200 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 TMEM249Q2WGJ8 235 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 Q6ZS92 163 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.91□□□□□ -0.18
ACTB-207ENST00000462494 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 LSM4Q9Y4Z0 139 aaKnown RBP13.91□□□□□ -0.18
ACTB-207ENST00000462494 OR51B2Q9Y5P1 312 aa13.91□□□□□ -0.18
ACTB-207ENST00000462494 RAI1Q7Z5J4 1906 aaPredicted RBP13.91□□□□□ -0.18
ACTB-207ENST00000462494 SCO2A0A1W2PP80 73 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 TNFSF4P23510 183 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 TIMP3P35625 211 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 SPATA31B1PQ5VZV4 182 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 IGF2-ASQ6U949 168 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 STPG3Q8N7X2 389 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 SEPSECSQ9HD40 501 aaKnown RBP13.9□□□□□ -0.18
ACTB-207ENST00000462494 DSCAML1Q8TD84 2053 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 GGCTO75223 188 aaKnown RBP13.9□□□□□ -0.18
ACTB-207ENST00000462494 IRF2P14316 349 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 HIST1H1BP16401 226 aaKnown RBP13.9□□□□□ -0.18
ACTB-207ENST00000462494 CD40P25942 277 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 GAMTQ14353 236 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 C3orf36Q3SXR2 165 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 SFXN3Q9BWM7 321 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 NCOR1P1Q9H4R4 102 aa13.9□□□□□ -0.18
ACTB-207ENST00000462494 TANC2Q9HCD6 1990 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 TMPRSS2O15393 492 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 NDUFB7P17568 137 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 CCL8P80075 99 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 EFNB3Q15768 340 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 ZNF439Q8NDP4 499 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 ZCCHC14Q8WYQ9 949 aaKnown RBP13.89□□□□□ -0.19
ACTB-207ENST00000462494 FAM122AQ96E09 287 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 ADTRPQ96IZ2 230 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 PRDM13Q9H4Q3 707 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 YTHDF2Q9Y5A9 579 aaKnown RBP13.89□□□□□ -0.19
ACTB-207ENST00000462494 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
ACTB-207ENST00000462494 MAP1BP46821 2468 aaKnown RBP13.89□□□□□ -0.19
ACTB-207ENST00000462494 FOXH1O75593 365 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 IGKV1-16P04430 117 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 IGFBP2P18065 325 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 RAB31Q13636 194 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 PRSS8Q16651 343 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 ACTL10Q5JWF8 245 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 RBMXL3Q8N7X1 1067 aaKnown RBP13.88□□□□□ -0.19
ACTB-207ENST00000462494 A0A0U1RQK1 487 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 ZNF320A2RRD8 509 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 ZNF729A6NN14 1252 aaPredicted RBP13.88□□□□□ -0.19
ACTB-207ENST00000462494 A8MXE2 369 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 J3QR06 171 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 ACTL6BO94805 426 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 RHOBP62745 196 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 RND1Q92730 232 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 SFRP2Q96HF1 295 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 TP53TG5Q9Y2B4 290 aa13.88□□□□□ -0.19
ACTB-207ENST00000462494 TRBV20OR9-2A0A075B6H5 130 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 MDFIC2A0A1B0GVS7 189 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 CRYABP02511 175 aaKnown RBP13.87□□□□□ -0.19
ACTB-207ENST00000462494 AMBPP02760 352 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 IL3RAP26951 378 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 GCHFRP30047 84 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 NUBP1P53384 320 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 ZNF788Q6ZQV5 615 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 ZCCHC24Q8N2G6 241 aaKnown RBP13.87□□□□□ -0.19
ACTB-207ENST00000462494 CISD2Q8N5K1 135 aaKnown RBP13.87□□□□□ -0.19
ACTB-207ENST00000462494 OR4P4Q8NGL7 312 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 LRFN3Q9BTN0 628 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms