RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 DEFA1P59665 94 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 DEFA3P59666 94 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
CPNE1-221ENST00000462352 AKIRIN2Q53H80 203 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 C19orf54Q5BKX5 351 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 TMEM268Q5VZI3 342 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 HIST2H2BDQ6DRA6 164 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 UNQ5815/PRO19632Q6UWF5 114 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 SHISA2Q6UWI4 295 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 H2BFWTQ7Z2G1 175 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 ZNF695Q8IW36 515 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 MINDY2Q8NBR6 621 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 IL22RA2Q969J5 263 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 PHB2Q99623 299 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 NUDT15Q9NV35 164 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 NSG2Q9Y328 171 aa9.25□□□□□ -0.93
CPNE1-221ENST00000462352 TRAV6A0A075B6T7 132 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 A0A0G2JRQ6 117 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 A0A1B0GW64 132 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 A0A1W2PN81 502 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 C9orf170A2RU37 121 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 E7EUB6 86 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 SNAPC5O75971 98 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 OPN1MWP04001 364 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 OR4E1P0C645 316 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 OPN1MW2P0DN77 364 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 OPN1MW3P0DN78 364 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 CHRNA7P36544 502 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 OR2B8PP59922 312 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 SRPXP78539 464 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 IZUMO4Q1ZYL8 232 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 ANKRD55Q3KP44 614 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 TCTEX1D4Q5JR98 221 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 ASPHD1Q5U4P2 390 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 TEX38Q6PEX7 206 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 NRARPQ7Z6K4 114 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 LGI3Q8N145 548 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 SLC35G3Q8N808 338 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 OR4X2Q8NGF9 303 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 RNASE11Q8TAA1 199 aaKnown RBP9.24□□□□□ -0.93
CPNE1-221ENST00000462352 ENKURQ8TC29 256 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 CASTOR1Q8WTX7 329 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 RRNAD1Q96FB5 475 aaKnown RBP9.24□□□□□ -0.93
CPNE1-221ENST00000462352 SPIN2AQ99865 258 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 SPIN2BQ9BPZ2 258 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 COMMD5Q9GZQ3 224 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 ALX4Q9H161 411 aaPredicted RBP9.24□□□□□ -0.93
CPNE1-221ENST00000462352 PRNDQ9UKY0 176 aa9.24□□□□□ -0.93
CPNE1-221ENST00000462352 TEX50A0A1B0GTY4 177 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 CGB1A6NKQ9 187 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 DBX1A6NMT0 343 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 C15orf61A6NNL5 157 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 TEX22C9J3V5 150 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 SOX15O60248 233 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 IGLV1-40P01703 118 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 IGHG4P01861 327 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 HLA-AP01891 365 aaKnown RBP9.23□□□□□ -0.93
CPNE1-221ENST00000462352 ELANEP08246 267 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 H2AFB2P0C5Z0 115 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 APELAP0DMC3 54 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 CD83Q01151 205 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 C4orf46Q504U0 113 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 LYZL2Q7Z4W2 148 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 FAM219AQ8IW50 185 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 COMMD1Q8N668 190 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 DUSP18Q8NEJ0 188 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 OR4A16Q8NH70 328 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 TMEM68Q96MH6 324 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 FYTTD1Q96QD9 318 aaKnown RBP9.23□□□□□ -0.93
CPNE1-221ENST00000462352 CITED2Q99967 270 aaPredicted RBP9.23□□□□□ -0.93
CPNE1-221ENST00000462352 TMEM14BQ9NUH8 114 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 FOXA2Q9Y261 457 aaPredicted RBP9.23□□□□□ -0.93
CPNE1-221ENST00000462352 OR51B2Q9Y5P1 312 aa9.23□□□□□ -0.93
CPNE1-221ENST00000462352 DNHD1Q96M86 4753 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 A0A0B4J293 547 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 A0A0B4J2A0 478 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 HMX3A6NHT5 357 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
CPNE1-221ENST00000462352 PSMB8P28062 276 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 MECP2P51608 486 aaKnown RBP9.22□□□□□ -0.93
CPNE1-221ENST00000462352 DHRS2Q13268 280 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 FOXE3Q13461 319 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 CXorf66Q5JRM2 361 aaPredicted RBP9.22□□□□□ -0.93
CPNE1-221ENST00000462352 Q6ZRM9 215 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 LCNL1Q6ZST4 164 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 LYG2Q86SG7 212 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 ZNF429Q86V71 674 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 LRTM2Q8N967 370 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 OR5T1Q8NG75 326 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 OR5M8Q8NGP6 311 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 OR1L8Q8NGR8 309 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 OR5B3Q8NH48 314 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
CPNE1-221ENST00000462352 GPR146Q96CH1 333 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 QTRT1Q9BXR0 403 aaKnown RBP9.22□□□□□ -0.93
CPNE1-221ENST00000462352 FKBP11Q9NYL4 201 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 SHPKQ9UHJ6 478 aa9.22□□□□□ -0.93
CPNE1-221ENST00000462352 PIGBOS1A0A0B4J2F0 54 aa9.21□□□□□ -0.94
CPNE1-221ENST00000462352 DUXBA0A1W2PPF3 345 aa9.21□□□□□ -0.94
CPNE1-221ENST00000462352 TCRBV4S1A1TA0A5B7 111 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms