RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-222	ENST00000461849	PSG5	Q15238	335 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	C5orf64	Q2M2E5	130 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	SP6	Q3SY56	376 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	C18orf65	Q6ZTR6	163 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	LYG2	Q86SG7	212 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	LRTM2	Q8N967	370 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	TEX45	Q8NA69	505 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	MINDY2	Q8NBR6	621 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	VSTM2A	Q8TAG5	236 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	RHOV	Q96L33	236 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	HSPB9	Q9BQS6	159 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	KIAA1456	Q9P272	454 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	C9orf170	A2RU37	121 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	INMT-MINDY4	F8WBC2	141 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	IGKV1-39	P01597	117 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	HLA-A	P01891	365 aa	Known RBP	10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	IGKV1D-39	P04432	117 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	IL5	P05113	134 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	RPLP1	P05386	114 aa	Known RBP	10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	CRYGB	P07316	175 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	SAA1	P0DJI8	122 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	ERVK-16	P61578	105 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	DHRS2	Q13268	280 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	FOXE3	Q13461	319 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	OXA1L	Q15070	435 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	TRIM16L	Q309B1	348 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	C4orf46	Q504U0	113 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	ETV3L	Q6ZN32	361 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	PUSL1	Q8N0Z8	303 aa	Known RBP	10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	LGI3	Q8N145	548 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	OR4A5	Q8NH83	315 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	RBPMS	Q93062	196 aa	Known RBP	10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	RBMXL1	Q96E39	390 aa	Known RBP	10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	SEC22A	Q96IW7	307 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	BET1L	Q9NYM9	111 aa		10.82	□□□□□ -0.68
RBM39-222	ENST00000461849	METTL1	Q9UBP6	276 aa	Known RBP	10.82	□□□□□ -0.68
RBM39-222	ENST00000461849		A0A0B4J2A0	478 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	DUXB	A0A1W2PPF3	345 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	SLC25A17	O43808	307 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	CREBL2	O60519	120 aa	Predicted RBP	10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	OR2A4	O95047	310 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	HLA-DRB1	P01911	266 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	IGF1	P05019	195 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	IL6R	P08887	468 aa	Predicted RBP	10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	SPN	P16150	400 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	CNTFR	P26992	372 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	HOXD3	P31249	432 aa	Predicted RBP	10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	CDX1	P47902	265 aa	Predicted RBP	10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	DEFB121	Q5J5C9	76 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	TMEM65	Q6PI78	240 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	FAM219A	Q8IW50	185 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	TMEM167A	Q8TBQ9	72 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	MITD1	Q8WV92	249 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	OR2A7	Q96R45	310 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	ZMAT5	Q9UDW3	170 aa	Known RBP	10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	SHPK	Q9UHJ6	478 aa		10.81	□□□□□ -0.68
RBM39-222	ENST00000461849	CCL24	O00175	119 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	KBTBD11	O94819	623 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	DHFR	P00374	187 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	KRAS	P01116	189 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849		P0C879	139 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	PLGLA	Q15195	96 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	TMEM268	Q5VZI3	342 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	OR4A47	Q6IF82	309 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	LIN54	Q6MZP7	749 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	LCNL1	Q6ZST4	164 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	PPP1R27	Q86WC6	154 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	SELENOH	Q8IZQ5	122 aa	Known RBP	10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	DMBX1	Q8NFW5	382 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	COQ8A	Q8NI60	647 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	LHFPL5	Q8TAF8	219 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	ZNF431	Q8TF32	576 aa	Predicted RBP	10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	LSM10	Q969L4	123 aa	Known RBP	10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	DUX3	Q96PT4	197 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	P2RX4	Q99571	388 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	FBXL15	Q9H469	300 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	GPN1	Q9HCN4	374 aa	Predicted RBP	10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	PARP11	Q9NR21	331 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	TMEM140	Q9NV12	185 aa		10.8	□□□□□ -0.68
RBM39-222	ENST00000461849	SNRPGP15	A8MWD9	76 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	IGKV1-5	P01602	117 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	IGHG4	P01861	327 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	MAS1L	P35410	378 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	G6PC	P35575	357 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	ANKRD55	Q3KP44	614 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	H2BFWT	Q7Z2G1	175 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	MMD2	Q8IY49	270 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	VKORC1L1	Q8N0U8	176 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	RNF152	Q8N8N0	203 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	OR5M8	Q8NGP6	311 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	CASTOR1	Q8WTX7	329 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	RRNAD1	Q96FB5	475 aa	Known RBP	10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	RAX2	Q96IS3	184 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	OR51J1	Q9H342	316 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	ZNF580	Q9UK33	172 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	WSB1	Q9Y6I7	421 aa		10.79	□□□□□ -0.68
RBM39-222	ENST00000461849	C7orf66	A4D0T2	115 aa		10.78	□□□□□ -0.68
RBM39-222	ENST00000461849	UPK2	O00526	184 aa		10.78	□□□□□ -0.68
RBM39-222	ENST00000461849	ATP6V0E1	O15342	81 aa		10.78	□□□□□ -0.68
RBM39-222	ENST00000461849	PSMB8	P28062	276 aa		10.78	□□□□□ -0.68

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