RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 BET1LQ9NYM9 111 aa3.36□□□□□ -1.87
ATP13A3-206ENST00000461660 AUP1Q9Y679 476 aa3.36□□□□□ -1.87
ATP13A3-206ENST00000461660 MINOS1-NBL1R4GNA1 71 aa3.36□□□□□ -1.87
ATP13A3-206ENST00000461660 CCDC168Q8NDH2 2452 aa3.36□□□□□ -1.87
ATP13A3-206ENST00000461660 CHD3Q12873 2000 aaKnown RBP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 DMXL2Q8TDJ6 3036 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 IGHV3OR16-10A0A075B7F0 116 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 IGHV1-3A0A0C4DH29 117 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 A0A1W2PPR1 153 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 IGKV1D-33P01593 117 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 IGKV1-33P01594 117 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 IGLV2-14P01704 120 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 IGKV1-16P04430 117 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 SNRNP70P08621 437 aaKnown RBP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 OPRK1P41145 380 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 RUNX1Q01196 453 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 PEA15Q15121 130 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 AKIRIN2Q53H80 203 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 TMEM177Q53S58 311 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 PXDC1Q5TGL8 231 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 OR5AN1Q8NGI8 311 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 OR52E5Q8NH55 327 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 MISP3Q96FF7 219 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 C5orf30Q96GV9 206 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 RASL11BQ9BPW5 248 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 FBXL15Q9H469 300 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 ZNF355PQ9NSJ1 428 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 FOXA2Q9Y261 457 aaPredicted RBP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 CELSR3Q9NYQ7 3312 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 LINC00862A6NCI5 91 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 ZFP92A6NM28 416 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 B4DSR2 109 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 MOSP00540 346 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 APOC3P02656 99 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 FABP1P07148 127 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 COL8A1P27658 744 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 SULT1A2P50226 295 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 FFAR4Q5NUL3 377 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 ETFRF1Q6IPR1 90 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 FAM122CQ6P4D5 195 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 LCN15Q6UWW0 184 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 ZNF841Q6ZN19 808 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 ZNF429Q86V71 674 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 TEX45Q8NA69 505 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 C8orf46Q8TAG6 207 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 ACTR3CQ9C0K3 210 aaPredicted RBP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 UNKLQ9H9P5 680 aaKnown RBP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 ZNF257Q9Y2Q1 563 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 TRAV3A0A0B4J244 114 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 KRBOX1C9JBD0 128 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 APELAP0DMC3 54 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 CD1BP29016 333 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 PRCDQ00LT1 54 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 RELBQ01201 579 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 POU2AF1Q16633 256 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 IL34Q6ZMJ4 242 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 C1orf122Q6ZSJ8 110 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 HSD17B13Q7Z5P4 300 aaPredicted RBP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 COMMD1Q8N668 190 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 TMEM167AQ8TBQ9 72 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 C10orf105Q8TEF2 133 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 TAF15Q92804 592 aaKnown RBP eCLIP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 CXorf58Q96LI9 332 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 RSG1Q9BU20 258 aa3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 USP9YO00507 2555 aaPredicted RBP3.35□□□□□ -1.87
ATP13A3-206ENST00000461660 DOPEY2Q9Y3R5 2298 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 CSPG4Q6UVK1 2322 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 A0A087X0M5 115 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 TRAV40A0A0B4J280 105 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 IGHV4-61A0A0C4DH41 118 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 A0A1B0GX30 115 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 F8W036 122 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 TNFRSF13BO14836 293 aaPredicted RBP3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 NBR2O15453 112 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 SOX15O60248 233 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 MPDU1O75352 247 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 TMEM50AO95807 157 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 CA2P00918 260 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 TGFAP01135 160 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 MSMBP08118 114 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 PPT1P50897 306 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 DLK1P80370 383 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 SERF2P84101 59 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 PJVKQ0ZLH3 352 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 TOR2AQ5JU69 321 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 RBMS3Q6XE24 437 aaKnown RBP3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 PPP1R27Q86WC6 154 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 CCDC28AQ8IWP9 274 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 OR4P4Q8NGL7 312 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 NRGNQ92686 78 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 BSCL2Q96G97 398 aaPredicted RBP3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 RNF5Q99942 180 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 GINS3Q9BRX5 216 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 SH3BGRL3Q9H299 93 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 ZNF430Q9H8G1 570 aaPredicted RBP3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 NPVFQ9HCQ7 196 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 MMP26Q9NRE1 261 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 CYTL1Q9NRR1 136 aa3.34□□□□□ -1.87
ATP13A3-206ENST00000461660 TBL2Q9Y4P3 447 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms