RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 OR4X2Q8NGF9 303 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 TEX47Q8TBZ9 253 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 ZNF675Q8TD23 568 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 NEK7Q8TDX7 302 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 FGF13Q92913 245 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 PHB2Q99623 299 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 HOPXQ9BPY8 73 aaPredicted RBP1.3□□□□□ -2.2
HDAC6-212ENST00000461608 CENPHQ9H3R5 247 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 XPNPEP1Q9NQW7 623 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 C8orf4Q9NR00 106 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 PRO2289Q9P1D8 64 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 STOML2Q9UJZ1 356 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 ANAPC10Q9UM13 185 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 HHLA3Q9XRX5 114 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 TIMM22Q9Y584 194 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 PXMP4Q9Y6I8 212 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 LTBP2Q14767 1821 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 MYO16Q9Y6X6 1858 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 DCCP43146 1447 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 NCAPD3P42695 1498 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 THOC2Q8NI27 1593 aaKnown RBP1.3□□□□□ -2.2
HDAC6-212ENST00000461608 TRPM6Q9BX84 2022 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 ATG2BQ96BY7 2078 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 SMIM9A6NGZ8 99 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 OMPP47874 163 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 HINT1P49773 126 aaPredicted RBP1.29□□□□□ -2.2
HDAC6-212ENST00000461608 CDK9P50750 372 aaKnown RBP1.29□□□□□ -2.2
HDAC6-212ENST00000461608 IDH3GP51553 393 aaPredicted RBP1.29□□□□□ -2.2
HDAC6-212ENST00000461608 OR4D2P58180 307 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 PSME3P61289 254 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 HIST1H4AP62805 103 aaKnown RBP1.29□□□□□ -2.2
HDAC6-212ENST00000461608 RPL30P62888 115 aaKnown RBP1.29□□□□□ -2.2
HDAC6-212ENST00000461608 ERHP84090 104 aaKnown RBP1.29□□□□□ -2.2
HDAC6-212ENST00000461608 TNFAIP6P98066 277 aaPredicted RBP1.29□□□□□ -2.2
HDAC6-212ENST00000461608 PMAIP1Q13794 54 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 SPA17Q15506 151 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 SS18Q15532 418 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 HIST2H3PS2Q5TEC6 136 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 SFXN4Q6P4A7 337 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 OR1M1Q8NGA1 313 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 SGMS2Q8NHU3 365 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 RASSF5Q8WWW0 418 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 DOHHQ9BU89 302 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 OR51I1Q9H343 314 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 ARL2BPQ9Y2Y0 163 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 TIMM9Q9Y5J7 89 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 V9GYQ6 96 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 ABCC12Q96J65 1359 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 ANKRD30AQ9BXX3 1397 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 HMGXB3Q12766 1538 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 LAMC3Q9Y6N6 1575 aa1.29□□□□□ -2.2
HDAC6-212ENST00000461608 HIVEP2P31629 2446 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 ARRDC5A6NEK1 342 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 J3QKU1 62 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 KPNA3O00505 521 aaPredicted RBP1.28□□□□□ -2.2
HDAC6-212ENST00000461608 KLRC4O43908 158 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 FADS1O60427 444 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 C1QAP02745 245 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 SRP19P09132 144 aaKnown RBP1.28□□□□□ -2.2
HDAC6-212ENST00000461608 ZNF705DP0CH99 300 aaPredicted RBP1.28□□□□□ -2.2
HDAC6-212ENST00000461608 FGF6P10767 208 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 IFI30P13284 250 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 CCL1P22362 96 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 CA5AP35218 305 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 KRTAP12-3P60328 96 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 OR2F1Q13607 317 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 FAM201AQ5SY85 155 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 TAC4Q86UU9 113 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 OR6V1Q8N148 313 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 C1orf158Q8N1D5 194 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 UMODL1-AS1Q8N2C9 162 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 OR10X1Q8NGY0 326 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 OR2T4Q8NH00 348 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 FAM172AQ8WUF8 416 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 RNASE6Q93091 150 aaKnown RBP1.28□□□□□ -2.2
HDAC6-212ENST00000461608 CNBD2Q96M20 576 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 NMNAT3Q96T66 252 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 KLF6Q99612 283 aaPredicted RBP1.28□□□□□ -2.2
HDAC6-212ENST00000461608 PRRT1Q99946 306 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 VPS29Q9UBQ0 182 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 FBXO5Q9UKT4 447 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 RTEL1-TNFRSF6BF6WH68 1400 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 ADGRL3Q9HAR2 1447 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 SMARCA2P51531 1590 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 BAZ1AQ9NRL2 1556 aaPredicted RBP1.28□□□□□ -2.2
HDAC6-212ENST00000461608 KIF21AQ7Z4S6 1674 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 CACNA1SQ13698 1873 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 NAV1Q8NEY1 1877 aa1.28□□□□□ -2.2
HDAC6-212ENST00000461608 RIMBP3CA6NJZ7 1639 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 RIMBP3BA6NNM3 1639 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 NESP48681 1621 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 RIMBP3Q9UFD9 1639 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 FLT4P35916 1363 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 A0A087WUJ7 227 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 MDFIC2A0A1B0GVS7 189 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 GNG14A0A1W2PPG7 69 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 CLDN24A6NM45 220 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 F8W036 122 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 LST1O00453 97 aa1.27□□□□□ -2.21
HDAC6-212ENST00000461608 PLA2G10O15496 165 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms