RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 LRTM2Q8N967 370 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 MINDY2Q8NBR6 621 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 GRPEL2Q8TAA5 225 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 CHPT1Q8WUD6 406 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 SRSF12Q8WXF0 261 aaKnown RBP8.85□□□□□ -0.99
SSBP1-202ENST00000461433 IL22RA2Q969J5 263 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 PALMDQ9NP74 551 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 TRAV41A0A0B4J266 112 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 A0A0B4J293 547 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 MSGN1A6NI15 193 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 TEX22C9J3V5 150 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 CREBL2O60519 120 aaPredicted RBP8.84□□□□□ -0.99
SSBP1-202ENST00000461433 SPNP16150 400 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 OR2B8PP59922 312 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 DHRS2Q13268 280 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 AKIRIN2Q53H80 203 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 HIST2H2BDQ6DRA6 164 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 C12orf54Q6X4T0 127 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 LYZL2Q7Z4W2 148 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 LYG2Q86SG7 212 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 SLC35G3Q8N808 338 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 LFNGQ8NES3 379 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 OR5AU1Q8NGC0 362 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 OR52B4Q8NGK2 314 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 ENKURQ8TC29 256 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 ZNF747Q9BV97 191 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 TMEM14BQ9NUH8 114 aa8.84□□□□□ -0.99
SSBP1-202ENST00000461433 TEX50A0A1B0GTY4 177 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 PSMB11A5LHX3 300 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 SOX15O60248 233 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 ATG12O94817 140 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 HLA-AP01891 365 aaKnown RBP8.83□□□□□ -1
SSBP1-202ENST00000461433 OPN1MWP04001 364 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 OPN1MW2P0DN77 364 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 OPN1MW3P0DN78 364 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 ANXA3P12429 323 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 AKR1C2P52895 323 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 RAB25P57735 213 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 LGI3Q8N145 548 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 ABHD5Q8WTS1 349 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 CASTOR1Q8WTX7 329 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 LSM10Q969L4 123 aaKnown RBP8.83□□□□□ -1
SSBP1-202ENST00000461433 GPR146Q96CH1 333 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 CITED1Q99966 193 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 MARVELD1Q9BSK0 173 aa8.83□□□□□ -1
SSBP1-202ENST00000461433 A0A0B4J2A0 478 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 C15orf61A6NNL5 157 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 SNAPC5O75971 98 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 ACTL6BO94805 426 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 DUS4LO95620 317 aaKnown RBP8.82□□□□□ -1
SSBP1-202ENST00000461433 IGLV1-40P01703 118 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 IGHG4P01861 327 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 APELAP0DMC3 54 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 CD28P10747 220 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 VDAC1P21796 283 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 RPL27AP46776 148 aaKnown RBP8.82□□□□□ -1
SSBP1-202ENST00000461433 SRPXP78539 464 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 DCTN2Q13561 401 aaKnown RBP8.82□□□□□ -1
SSBP1-202ENST00000461433 ECSCRQ19T08 205 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 C4orf46Q504U0 113 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 NMSQ5H8A3 153 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 UNQ5815/PRO19632Q6UWF5 114 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 FAM219AQ8IW50 185 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 RRNAD1Q96FB5 475 aaKnown RBP8.82□□□□□ -1
SSBP1-202ENST00000461433 GON7Q9BXV9 100 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 SHPKQ9UHJ6 478 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 FOXA2Q9Y261 457 aaPredicted RBP8.82□□□□□ -1
SSBP1-202ENST00000461433 STAB1Q9NY15 2570 aa8.82□□□□□ -1
SSBP1-202ENST00000461433 HMX3A6NHT5 357 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 PSMB8P28062 276 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 CD83Q01151 205 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 TMEM267Q0VDI3 215 aaPredicted RBP8.81□□□□□ -1
SSBP1-202ENST00000461433 AARDQ4LEZ3 155 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 ZNF429Q86V71 674 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 C3orf56Q8N813 242 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 RNF152Q8N8N0 203 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 C11orf44Q8N8P7 122 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 OR4A16Q8NH70 328 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 MITD1Q8WV92 249 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 SEC22CQ9BRL7 303 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 QTRT1Q9BXR0 403 aaKnown RBP8.81□□□□□ -1
SSBP1-202ENST00000461433 COMMD5Q9GZQ3 224 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 NDUFA4L2Q9NRX3 87 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 PRNDQ9UKY0 176 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 OR51B2Q9Y5P1 312 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 A0A1W2PN81 502 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 DUXBA0A1W2PPF3 345 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 PTTG1O95997 202 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 IL5P05113 134 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 CHRNA7P36544 502 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 SLC35B1P78383 322 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 TEX38Q6PEX7 206 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 PLET1Q6UQ28 207 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 LCNL1Q6ZST4 164 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 OR5T1Q8NG75 326 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 OR10W1Q8NGF6 305 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 SPATA3Q8NHX4 192 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 TMEM68Q96MH6 324 aa8.81□□□□□ -1
SSBP1-202ENST00000461433 FYTTD1Q96QD9 318 aaKnown RBP8.81□□□□□ -1
SSBP1-202ENST00000461433 SPIN2AQ99865 258 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms