RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 H3BT86 120 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 NOS1APO75052 506 aaPredicted RBP1.42□□□□□ -2.18
VCL-203ENST00000461383 NSA2O95478 260 aaKnown RBP1.42□□□□□ -2.18
VCL-203ENST00000461383 TFPTP0C1Z6 253 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 FGF6P10767 208 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 MSNP26038 577 aaKnown RBP1.42□□□□□ -2.18
VCL-203ENST00000461383 TPI1P60174 286 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 GLO1Q04760 184 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 SS18Q15532 418 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 LYZL1Q6UWQ5 148 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 CLDN22Q8N7P3 220 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 ZNF676Q8N7Q3 588 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 OR2T4Q8NH00 348 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 SLC7A6Q92536 515 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 ITFG2Q969R8 447 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 COMMD5Q9GZQ3 224 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.42□□□□□ -2.18
VCL-203ENST00000461383 RSL24D1Q9UHA3 163 aaKnown RBP1.42□□□□□ -2.18
VCL-203ENST00000461383 ABCC12Q96J65 1359 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 NUMA1Q14980 2115 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 RTTNQ86VV8 2226 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 MAST2Q6P0Q8 1798 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 MYH11P35749 1972 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 WDR90Q96KV7 1748 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 TRAV38-1A0A0B4J264 116 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 GGT3PA6NGU5 568 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 TMEM114B3SHH9 223 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 LEPROTO15243 131 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 IDH3GP51553 393 aaPredicted RBP1.41□□□□□ -2.18
VCL-203ENST00000461383 RAB14P61106 215 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 HIST1H4AP62805 103 aaKnown RBP1.41□□□□□ -2.18
VCL-203ENST00000461383 IFITM2Q01629 132 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 HES1Q14469 280 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 Q6ZTI0 123 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 LRRC28Q86X40 367 aaPredicted RBP1.41□□□□□ -2.18
VCL-203ENST00000461383 KRTAP13-1Q8IUC0 172 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 C20orf196Q8IYI0 205 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 TMEM86BQ8N661 226 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 ANKRD29Q8N6D5 301 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 OR5B17Q8NGF7 314 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 OR8B12Q8NGG6 310 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 OR1L8Q8NGR8 309 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 RNASE11Q8TAA1 199 aaKnown RBP1.41□□□□□ -2.18
VCL-203ENST00000461383 DCANP1Q8TF63 244 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 KLK6Q92876 244 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 DOHHQ9BU89 302 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 PRTFDC1Q9NRG1 225 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 CMTM6Q9NX76 183 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 FUT9Q9Y231 359 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 PKIGQ9Y2B9 76 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 BAHCC1Q9P281 2608 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 CPAMD8Q8IZJ3 1885 aa1.41□□□□□ -2.18
VCL-203ENST00000461383 IGLV3-9A0A075B6K5 115 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 IGHV3-64A0A075B6Q5 118 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 TMSB15BA0A087X1C1 80 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 A0A0G2JQZ4 141 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 A0A0J9YY10 115 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 A0A1B0GX78 115 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 H7C2G1 150 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 CRYZL1O95825 349 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 HLA-DRB1P01911 266 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 PPBPP02775 128 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 IGKV1-16P04430 117 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 MSMBP08118 114 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 LGALS1P09382 135 aaKnown RBP1.4□□□□□ -2.19
VCL-203ENST00000461383 IFI30P13284 250 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 HLA-DMBP28068 263 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 RPL28P46779 137 aaKnown RBP1.4□□□□□ -2.19
VCL-203ENST00000461383 AP3S2P59780 193 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 RELAQ04206 551 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 SLC38A11Q08AI6 406 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 FADDQ13158 208 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 GUK1Q16774 197 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 ACOT6Q3I5F7 207 aaPredicted RBP1.4□□□□□ -2.19
VCL-203ENST00000461383 SYPL2Q5VXT5 272 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 Q6ZS49 121 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 LRRC25Q8N386 305 aaPredicted RBP1.4□□□□□ -2.19
VCL-203ENST00000461383 MCFD2Q8NI22 146 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 C8orf76Q96K31 380 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 PPP1R2P1Q96PQ5 205 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 WDR61Q9GZS3 305 aaKnown RBP1.4□□□□□ -2.19
VCL-203ENST00000461383 CXCL16Q9H2A7 254 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 EFCAB1Q9HAE3 211 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 SAMHD1Q9Y3Z3 626 aaKnown RBP1.4□□□□□ -2.19
VCL-203ENST00000461383 RBM7Q9Y580 266 aaKnown RBP1.4□□□□□ -2.19
VCL-203ENST00000461383 TIMM22Q9Y584 194 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 RTEL1-TNFRSF6BF6WH68 1400 aa1.4□□□□□ -2.19
VCL-203ENST00000461383 STRCP1A6NGW2 1772 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 REREQ9P2R6 1566 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 FN1P02751 2386 aaKnown RBP1.39□□□□□ -2.19
VCL-203ENST00000461383 TRAV7A0A075B6U4 112 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 A0A1B0GVG6 124 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 PQLC2LA1A4F0 135 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 HMSDA8MTL9 139 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 KPNA3O00505 521 aaPredicted RBP1.39□□□□□ -2.19
VCL-203ENST00000461383 OVOL1O14753 267 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 CHP2O43745 196 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 TCRBP04435 133 aa1.39□□□□□ -2.19
VCL-203ENST00000461383 SULT1A3P0DMM9 295 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms