RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 ZNF735P0CB33 412 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TMEM204Q9BSN7 226 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TEX50A0A1B0GTY4 177 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PITX3O75364 302 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 UPK3AO75631 287 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CELA2BP08218 269 aaPredicted RBP5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FAM3BP58499 235 aaPredicted RBP5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TMEM155Q4W5P6 130 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 C10orf113Q5VZT2 155 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 ASCL4Q6XD76 172 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 OR1B1Q8NGR6 318 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 KCNS1Q96KK3 526 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 WFIKKN1Q96NZ8 548 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 LINC01587Q99440 93 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 MANBALQ9NQG1 85 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 A0A1W2PQM1 296 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 ZNF253O75346 499 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 DLX6P56179 175 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FAM27BQ5VT28 67 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 AQP3Q92482 292 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PTX4Q96A99 478 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SMIM12Q96EX1 92 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 ZNF488Q96MN9 340 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 AMELYQ99218 206 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 DIRC3C9JPN6 131 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 ZNF207O43670 478 aaKnown RBP5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PAGE4O60829 102 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 HYPMO75409 117 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TNFRSF6BO95407 300 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 MPV17P39210 176 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 GNG4P50150 75 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RND3P61587 244 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 MESP2Q0VG99 397 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SLAQ13239 276 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 USMG5Q96IX5 58 aa5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PRRC2BQ5JSZ5 2229 aaKnown RBP5.31□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TRBV5-7A0A0A0MS05 114 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 LOC102723971A0A1B0GUV8 181 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RNF222A6NCQ9 220 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 LINC01549A6NIU2 74 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TMEM238C9JI98 176 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 H3BRM9 83 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 M0R2Z0 102 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 HSPB1P04792 205 aaKnown RBP5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 BCL2P10415 239 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 HOXA5P20719 270 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 NPBWR2P48146 333 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FDX2Q6P4F2 183 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FAM159AQ6UWV7 190 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 GAPTQ8N292 157 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 C5orf17Q8NAS9 161 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 OR10G8Q8NGN5 311 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 VSTM2LQ96N03 204 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 C5orf66Q9H5L9 145 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 DNAJC4Q9NNZ3 241 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 MSGN1A6NI15 193 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 UBE2CO00762 179 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PRSS1P07477 247 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 MGPP08493 103 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 DANCRP0C864 163 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CD1BP29016 333 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PTGDSP41222 190 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CR1LQ2VPA4 569 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 VAX1Q5SQQ9 334 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 IGFL3Q6UXB1 125 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FAM169BQ8N8A8 192 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 DLX4Q92988 240 aaPredicted RBP5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 C18orf12Q96KH6 178 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TP53RKQ96S44 253 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 IGLV3-12A0A075B6K2 115 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 IGKV1D-16P01601 117 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 IER3P46695 156 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 GLIPR1P48060 266 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TCL1AP56279 114 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TMEM50BP56557 158 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 APCDD1LQ8NCL9 501 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 HSPB9Q9BQS6 159 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 C19orf24Q9BVV8 132 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 GSX1Q9H4S2 264 aaPredicted RBP5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FOXA2Q9Y261 457 aaPredicted RBP5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 A0A1B0GW15 77 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 OR11H12B2RN74 326 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 GPX1P07203 203 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CGB3P0DN86 165 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FXYD3Q14802 87 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PLPPR5Q32ZL2 321 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PRSS3P2Q8NHM4 247 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FAM110DQ8TAY7 271 aaPredicted RBP5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 ZNF721Q8TF20 911 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 LSM10Q969L4 123 aaKnown RBP5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TXNDC17Q9BRA2 123 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 DOCK6Q96HP0 2047 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 A0A1W2PP11 408 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RNF223E7ERA6 249 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 APOMO95445 188 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PMELP40967 661 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SPATA45Q537H7 98 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SPANXN1Q5VSR9 72 aa5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 H1FOOQ8IZA3 346 aaPredicted RBP5.3□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PPYP01298 95 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms