RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 FAM53AQ6NSI3 398 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-205ENST00000460485 DUX4L9Q6RFH8 374 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-205ENST00000460485 ZNF383Q8NA42 475 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 CLRN3Q8NCR9 226 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 OR5B3Q8NH48 314 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 NEU4Q8WWR8 484 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-205ENST00000460485 TMEM231Q9H6L2 316 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 HEYLQ9NQ87 328 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-205ENST00000460485 TCF19Q9Y242 345 aa11.55□□□□□ -0.56
ERCC3-205ENST00000460485 TMA7Q9Y2S6 64 aaKnown RBP11.55□□□□□ -0.56
ERCC3-205ENST00000460485 ZNF469Q96JG9 3925 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-205ENST00000460485 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 C15orf62A8K5M9 175 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 INS-IGF2F8WCM5 200 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 DVL1O14640 695 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 GOSR1O95249 250 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 IL6RP08887 468 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-205ENST00000460485 MDKP21741 143 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-205ENST00000460485 LOXP28300 417 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-205ENST00000460485 FHITP49789 147 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 GUCA2BQ16661 112 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 TMEM249Q2WGJ8 235 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 RBMS3Q6XE24 437 aaKnown RBP11.54□□□□□ -0.56
ERCC3-205ENST00000460485 MRPL41Q8IXM3 137 aaKnown RBP11.54□□□□□ -0.56
ERCC3-205ENST00000460485 OR5AN1Q8NGI8 311 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 C8orf46Q8TAG6 207 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 SFT2D1Q8WV19 159 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 H1FXQ92522 213 aaKnown RBP11.54□□□□□ -0.56
ERCC3-205ENST00000460485 TIMD4Q96H15 378 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 MS4A7Q9GZW8 240 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-205ENST00000460485 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 MIOXQ9UGB7 285 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 WDR83OSQ9Y284 106 aa11.54□□□□□ -0.56
ERCC3-205ENST00000460485 TET2Q6N021 2002 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-205ENST00000460485 TSPAN9O75954 239 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 IFNA10P01566 189 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 FGF7P21781 194 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 USF1P22415 310 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-205ENST00000460485 GNG10P50151 68 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 DLX6P56179 175 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-205ENST00000460485 SOHLH1Q5JUK2 328 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 OR13D1Q8NGV5 346 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 OR10X1Q8NGY0 326 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 CLDND2Q8NHS1 167 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 RAB1CQ92928 201 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 RSG1Q9BU20 258 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 ACTR3CQ9C0K3 210 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-205ENST00000460485 TUBA4BQ9H853 241 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 SMCO4Q9NRQ5 59 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 RPRMQ9NS64 109 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 DCAF16Q9NXF7 216 aa11.53□□□□□ -0.56
ERCC3-205ENST00000460485 AMMECR1Q9Y4X0 333 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-205ENST00000460485 LOC102723971A0A1B0GUV8 181 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 MAP1LC3B2A6NCE7 125 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 J3QR06 171 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 UPK2O00526 184 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 IGHV2-70P01814 119 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 CT45A6P0DMU7 189 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 CT45A5P0DMU8 189 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 CT45A7P0DMV0 189 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 BCL2P10415 239 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 CD1BP29016 333 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 PRCDQ00LT1 54 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 RAB31Q13636 194 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 ATRAIDQ6UW56 229 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-205ENST00000460485 SLC24A4Q8NFF2 622 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 OR4C13Q8NGP0 309 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 LINC01560Q8TB33 94 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 ZDHHC16Q969W1 377 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 RCC1LQ96I51 464 aaKnown RBP11.52□□□□□ -0.57
ERCC3-205ENST00000460485 NPCDR1Q9BY65 106 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 MAP1LC3BQ9GZQ8 125 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 PLEKHA3Q9HB20 300 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 MANBALQ9NQG1 85 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 CTSZQ9UBR2 303 aa11.52□□□□□ -0.57
ERCC3-205ENST00000460485 ACANP16112 2415 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 A0A1W2PN81 502 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 TSPAN4O14817 238 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 CYB5BO43169 146 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 KBTBD11O94819 623 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 IGHV1-8P0DP01 117 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 NPY1RP25929 384 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 CHRNA7P36544 502 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 OPRK1P41145 380 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 PRRX1P54821 245 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 TFF3Q07654 80 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 PNRC1Q12796 327 aaPredicted RBP11.51□□□□□ -0.57
ERCC3-205ENST00000460485 ETV3LQ6ZN32 361 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 SSX9Q7RTT3 188 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 OR8B3Q8NGG8 313 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 OR8B2Q96RD0 313 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 TXNDC17Q9BRA2 123 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 TMEM133Q9H2Q1 129 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 SLC39A9Q9NUM3 307 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 WASHC3Q9Y3C0 194 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 OR51B2Q9Y5P1 312 aa11.51□□□□□ -0.57
ERCC3-205ENST00000460485 PRRC2AP48634 2157 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms