RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 KCNIP4Q6PIL6 250 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 OR10G4Q8NGN3 311 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 HSPB9Q9BQS6 159 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 ENY2Q9NPA8 101 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 RPRMQ9NS64 109 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
LMNB1-203ENST00000460265 IGKV1-5P01602 117 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 TNFSF4P23510 183 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 RPL30P62888 115 aaKnown RBP12.87□□□□□ -0.35
LMNB1-203ENST00000460265 TNFAIP6P98066 277 aaPredicted RBP12.87□□□□□ -0.35
LMNB1-203ENST00000460265 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 Q6ZR03 302 aa12.87□□□□□ -0.35
LMNB1-203ENST00000460265 NUPR1O60356 82 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 CHRNA7P36544 502 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 CCL17Q92583 94 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 TMPRSS2O15393 492 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 CLDN14O95500 239 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 TPPP2P59282 170 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 TAS2R30P59541 319 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 ACTL10Q5JWF8 245 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 Q6ZN92 141 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 BTF3L4Q96K17 158 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 CCL13Q99616 98 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 RBKSQ9H477 322 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 NCOR1P1Q9H4R4 102 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 GRIFINA4D1Z8 144 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 DEFA4P12838 97 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 HNRNPA3P51991 378 aaKnown RBP12.86□□□□□ -0.35
LMNB1-203ENST00000460265 RPL39P5Q59GN2 51 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 S1PR3Q99500 378 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 VSIRQ9H7M9 311 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
LMNB1-203ENST00000460265 MALRD1Q5VYJ5 2156 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 IGHG3P01860 377 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 UBE2V1Q13404 147 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 ZNF146Q15072 292 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 FAM78BQ5VT40 261 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 UBE2G2P60604 165 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 PDLIM3Q53GG5 364 aaPredicted RBP12.85□□□□□ -0.35
LMNB1-203ENST00000460265 ZNF645Q8N7E2 425 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 ZNF738Q8NE65 137 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 Q8NFD4 153 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 AKAP13Q12802 2813 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 A0A1W2PPV4 95 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 ODAMA1E959 279 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 M0QZ24 198 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 IGKV1-39P01597 117 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 IGKV1D-39P04432 117 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 KRTDAPP60985 99 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 PIP4P1Q86T03 277 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 COQ2Q96H96 371 aa12.85□□□□□ -0.35
LMNB1-203ENST00000460265 FAM103A1Q9BTL3 118 aaKnown RBP12.85□□□□□ -0.35
LMNB1-203ENST00000460265 ZNF737O75373 536 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 GYPAP02724 150 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 EGR1P18146 543 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 HINT1P49773 126 aaPredicted RBP12.84□□□□□ -0.35
LMNB1-203ENST00000460265 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
LMNB1-203ENST00000460265 VAMP3Q15836 100 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 ABHD17AQ96GS6 310 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 DYNLRB1Q9NP97 96 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 DMXL2Q8TDJ6 3036 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 PLA2G5P39877 138 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 RPL23P62829 140 aaKnown RBP12.84□□□□□ -0.35
LMNB1-203ENST00000460265 ZNF585BQ52M93 769 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 UNQ5815/PRO19632Q6UWF5 114 aa12.84□□□□□ -0.35
LMNB1-203ENST00000460265 TNRC6BQ9UPQ9 1833 aaKnown RBP12.84□□□□□ -0.35
LMNB1-203ENST00000460265 IGKV3-15P01624 115 aa12.83□□□□□ -0.35
LMNB1-203ENST00000460265 ARL16Q0P5N6 197 aa12.83□□□□□ -0.35
LMNB1-203ENST00000460265 ORAOV1Q8WV07 137 aa12.83□□□□□ -0.35
LMNB1-203ENST00000460265 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.35
LMNB1-203ENST00000460265 PLSCR4Q9NRQ2 329 aa12.83□□□□□ -0.35
LMNB1-203ENST00000460265 PLXNB1O43157 2135 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 PRSS47A8MTI9 375 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 FFAR4Q5NUL3 377 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 ZNF474Q6S9Z5 364 aaPredicted RBP12.83□□□□□ -0.36
LMNB1-203ENST00000460265 MRGPRGQ86SM5 289 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 RND1Q92730 232 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 CDKN1AP38936 164 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 CYP2G1PQ6ZSU1 146 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 BAGE3Q86Y29 109 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 BAGE2Q86Y30 109 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 CD177Q8N6Q3 437 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 OR4F5Q8NH21 305 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 OR4F4Q96R69 305 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 P2RX4Q99571 388 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 HIPK2Q9H2X6 1198 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.36
LMNB1-203ENST00000460265 CIDEAO60543 219 aa12.82□□□□□ -0.36
LMNB1-203ENST00000460265 C1orf185Q5T7R7 199 aa12.82□□□□□ -0.36
LMNB1-203ENST00000460265 AURKAIP1Q9NWT8 199 aaPredicted RBP12.82□□□□□ -0.36
LMNB1-203ENST00000460265 TRGV8A0A0C4DH27 118 aa12.82□□□□□ -0.36
LMNB1-203ENST00000460265 PAX9P55771 341 aa12.82□□□□□ -0.36
LMNB1-203ENST00000460265 SLC35E4Q6ICL7 350 aa12.82□□□□□ -0.36
LMNB1-203ENST00000460265 Q6ZS49 121 aa12.82□□□□□ -0.36
LMNB1-203ENST00000460265 Q6ZWC4 215 aa12.82□□□□□ -0.36
LMNB1-203ENST00000460265 OR5AU1Q8NGC0 362 aa12.82□□□□□ -0.36
LMNB1-203ENST00000460265 ADGRG4Q8IZF6 3080 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms