RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 RBMXL2O75526 392 aaKnown RBP14.22□□□□□ -0.13
HOXD3-204ENST00000459979 S1PR2O95136 353 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 CD74P04233 296 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 CRYGCP07315 174 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 S100GP29377 79 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 ZNF45Q02386 682 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 ZNF585BQ52M93 769 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 RNASE10Q5GAN6 216 aaKnown RBP14.22□□□□□ -0.13
HOXD3-204ENST00000459979 ZNF429Q86V71 674 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 FAM223AQ8IWN6 122 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 TMEM229BQ8NBD8 167 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 PRR25Q96S07 402 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 TMEM140Q9NV12 185 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 CEPT1Q9Y6K0 416 aa14.22□□□□□ -0.13
HOXD3-204ENST00000459979 HMX3A6NHT5 357 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 M0QYG6 137 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 CTDSPLO15194 276 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 CD3DP04234 171 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 IFNA6P05013 189 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 ZP3P21754 424 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 TAS2R19P59542 299 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 ACSM6Q6P461 480 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 NECAP1Q8NC96 275 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 SRSF8Q9BRL6 282 aaKnown RBP14.21□□□□□ -0.13
HOXD3-204ENST00000459979 NXF2Q9GZY0 626 aaKnown RBP14.21□□□□□ -0.13
HOXD3-204ENST00000459979 HRASLSQ9HDD0 168 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 AKIP1Q9NQ31 210 aa14.21□□□□□ -0.13
HOXD3-204ENST00000459979 TENM3Q9P273 2699 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 TRAV3A0A0B4J244 114 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 CGB1A6NKQ9 187 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 MARCH11A6NNE9 402 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 PTBP1P26599 531 aaKnown RBP eCLIP14.2□□□□□ -0.14
HOXD3-204ENST00000459979 LPAR6P43657 344 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 OR2B8PP59922 312 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 RHOGP84095 191 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 RNASE12Q5GAN4 147 aaKnown RBP14.2□□□□□ -0.14
HOXD3-204ENST00000459979 DMBX1Q8NFW5 382 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 SMIM4Q8WVI0 70 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 ZNF486Q96H40 463 aaPredicted RBP14.2□□□□□ -0.14
HOXD3-204ENST00000459979 DIRAS2Q96HU8 199 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 FYTTD1Q96QD9 318 aaKnown RBP14.2□□□□□ -0.14
HOXD3-204ENST00000459979 PEF1Q9UBV8 284 aaKnown RBP14.2□□□□□ -0.14
HOXD3-204ENST00000459979 U3KQK5 164 aa14.2□□□□□ -0.14
HOXD3-204ENST00000459979 CTRB1P17538 263 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 PSMB6P28072 239 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 ERVK-16P61578 105 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 RND3P61587 244 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 ATP5G2Q06055 141 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 DCTN2Q13561 401 aaKnown RBP14.19□□□□□ -0.14
HOXD3-204ENST00000459979 KLF5Q13887 457 aaPredicted RBP14.19□□□□□ -0.14
HOXD3-204ENST00000459979 PHLDA2Q53GA4 152 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 FAM209BQ5JX69 171 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 CTRB2Q6GPI1 263 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 THOC7Q6I9Y2 204 aaKnown RBP14.19□□□□□ -0.14
HOXD3-204ENST00000459979 TBC1D26Q86UD7 250 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 ASCL2Q99929 193 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 COMMD5Q9GZQ3 224 aa14.19□□□□□ -0.14
HOXD3-204ENST00000459979 DPPA5A6NC42 116 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 DHFRP00374 187 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 PRH1P02810 166 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 MYOD1P15172 320 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 AREGP15514 252 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 STEAP1BQ6NZ63 245 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 TERB2Q8NHR7 220 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 FANCD2OSQ96PS1 177 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 SOSTQ9BQB4 213 aa14.18□□□□□ -0.14
HOXD3-204ENST00000459979 C6orf62Q9GZU0 229 aaPredicted RBP14.18□□□□□ -0.14
HOXD3-204ENST00000459979 LSM4Q9Y4Z0 139 aaKnown RBP14.18□□□□□ -0.14
HOXD3-204ENST00000459979 IGLC7A0M8Q6 106 aa14.17□□□□□ -0.14
HOXD3-204ENST00000459979 ANKRD34BA5PLL1 514 aa14.17□□□□□ -0.14
HOXD3-204ENST00000459979 RAB3DO95716 219 aa14.17□□□□□ -0.14
HOXD3-204ENST00000459979 KRASP01116 189 aa14.17□□□□□ -0.14
HOXD3-204ENST00000459979 DEFA5Q01523 94 aa14.17□□□□□ -0.14
HOXD3-204ENST00000459979 HSD17B13Q7Z5P4 300 aaPredicted RBP14.17□□□□□ -0.14
HOXD3-204ENST00000459979 OR4D10Q8NGI6 311 aa14.17□□□□□ -0.14
HOXD3-204ENST00000459979 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.16□□□□□ -0.14
HOXD3-204ENST00000459979 GSTZ1O43708 216 aaPredicted RBP14.16□□□□□ -0.14
HOXD3-204ENST00000459979 SAP30O75446 220 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 OR2J3O76001 311 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 TRBV12-3P01733 135 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 NHLRC4P0CG21 123 aaPredicted RBP14.16□□□□□ -0.14
HOXD3-204ENST00000459979 HIST1H1BP16401 226 aaKnown RBP14.16□□□□□ -0.14
HOXD3-204ENST00000459979 TNFSF8P32971 234 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 ECI1P42126 302 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 IL18Q14116 193 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 MEF2DQ14814 521 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 C15orf32Q32M92 178 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 MCFD2Q8NI22 146 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 ELOVL1Q9BW60 279 aa14.16□□□□□ -0.14
HOXD3-204ENST00000459979 QTRT1Q9BXR0 403 aaKnown RBP14.16□□□□□ -0.14
HOXD3-204ENST00000459979 RBM38Q9H0Z9 239 aaKnown RBP14.16□□□□□ -0.14
HOXD3-204ENST00000459979 RSL24D1Q9UHA3 163 aaKnown RBP14.16□□□□□ -0.14
HOXD3-204ENST00000459979 ZNF256Q9Y2P7 627 aaPredicted RBP14.16□□□□□ -0.14
HOXD3-204ENST00000459979 TEX50A0A1B0GTY4 177 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 ZNF701M0R085 212 aaPredicted RBP14.15□□□□□ -0.14
HOXD3-204ENST00000459979 RPA2P15927 270 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 G6PCP35575 357 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 EXOSC2Q13868 293 aaKnown RBP14.15□□□□□ -0.14
HOXD3-204ENST00000459979 OR1L8Q8NGR8 309 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 ZFAND1Q8TCF1 268 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms