RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 SMIM21Q3B7S5 101 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 CMTM2Q8TAZ6 248 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 SPTBN4Q9H254 2564 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 WDFY4Q6ZS81 3184 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 MED13Q9UHV7 2174 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 PTPRZ1P23471 2315 aaPredicted RBP7.07□□□□□ -1.28
VPS50-208ENST00000458707 TRAV38-1A0A0B4J264 116 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 IGHV2-70DA0A0C4DH43 119 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 A0A1B0GV72 72 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 PRSS46E5RG02 174 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 TNFSF13O75888 250 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 MMP23AO75900 390 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 HBZP02008 142 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 EGR1P18146 543 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 LINC00310P59036 64 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 OR1C1Q15619 314 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 PDLIM3Q53GG5 364 aaPredicted RBP7.07□□□□□ -1.28
VPS50-208ENST00000458707 OCIAD2Q56VL3 154 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 TPTE2P1Q5T6R2 138 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 CST9LP1Q5W188 147 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 MDP1Q86V88 176 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 OR52L2PQ8NGH6 319 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 TBX15Q96SF7 602 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 HSD17B10Q99714 261 aaKnown RBP7.07□□□□□ -1.28
VPS50-208ENST00000458707 LY96Q9Y6Y9 160 aa7.07□□□□□ -1.28
VPS50-208ENST00000458707 A0A1W2PPV4 95 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 PGPEP1LA6NFU8 196 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 LINC00473A8K010 186 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 IQCF6A8MYZ5 107 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 CXorf1O96002 111 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 KITLGP21583 273 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 CHRNB4P30926 498 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 TPPP2P59282 170 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 RPS16P62249 146 aaKnown RBP7.06□□□□□ -1.28
VPS50-208ENST00000458707 TBC1D28Q2M2D7 210 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 ZNF718Q3SXZ3 478 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 MORN2Q502X0 79 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 GCSAMLQ5JQS6 135 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 SPATA46Q5T0L3 261 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 Q6ZWC4 215 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 TCF23Q7RTU1 214 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 ZNF808Q8N4W9 903 aaPredicted RBP7.06□□□□□ -1.28
VPS50-208ENST00000458707 OR10G8Q8NGN5 311 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 OR1L6Q8NGR2 347 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 CT55Q8WUE5 264 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 MIEN1Q9BRT3 115 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 TMEM204Q9BSN7 226 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 QTRT1Q9BXR0 403 aaKnown RBP7.06□□□□□ -1.28
VPS50-208ENST00000458707 ZDHHC11Q9H8X9 412 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 IL36BQ9NZH7 164 aa7.06□□□□□ -1.28
VPS50-208ENST00000458707 TRAV30A0A087WSZ9 112 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 ZNF705FA8MVS1 300 aaPredicted RBP7.05□□□□□ -1.28
VPS50-208ENST00000458707 C9JCJ5 164 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 LIPFP07098 398 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 ZNF705DP0CH99 300 aaPredicted RBP7.05□□□□□ -1.28
VPS50-208ENST00000458707 ZNF705BP0CI00 300 aaPredicted RBP7.05□□□□□ -1.28
VPS50-208ENST00000458707 ARL14EPLP0DKL9 152 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 MAGEA5P43359 124 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 CEBPDP49716 269 aaPredicted RBP7.05□□□□□ -1.28
VPS50-208ENST00000458707 RANP62826 216 aaKnown RBP7.05□□□□□ -1.28
VPS50-208ENST00000458707 RBPJQ06330 500 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 Q0VG73 95 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 TCF15Q12870 199 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 DCAF12Q5T6F0 453 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 FAM53AQ6NSI3 398 aaPredicted RBP7.05□□□□□ -1.28
VPS50-208ENST00000458707 OR52E5Q8NH55 327 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 OR4S2Q8NH73 311 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 OCC1Q8TAD7 63 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 FAM222BQ8WU58 562 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 NINJ1Q92982 152 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 C11orf52Q96A22 123 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 COQ2Q96H96 371 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 THOC3Q96J01 351 aaKnown RBP7.05□□□□□ -1.28
VPS50-208ENST00000458707 SLC35E1Q96K37 410 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 TTTY12Q9BZ98 90 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 ZFHX2Q9C0A1 2572 aaPredicted RBP7.05□□□□□ -1.28
VPS50-208ENST00000458707 CFAP47Q6ZTR5 3102 aa7.05□□□□□ -1.28
VPS50-208ENST00000458707 OR9G9P0C7N8 305 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 RPL29P47914 159 aaKnown RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 COMPP49747 757 aaPredicted RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 EDDM3BP56851 147 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 PEAR1Q5VY43 1037 aaPredicted RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 C6orf15Q6UXA7 325 aaPredicted RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 C11orf53Q8IXP5 236 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 TMEM251Q8N6I4 163 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 ZNF596Q8TC21 504 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 SDSLQ96GA7 329 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 MGST2Q99735 147 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 GGTLC1Q9BX51 225 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 LOXL2Q9Y4K0 774 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 DCHS1Q96JQ0 3298 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 TRBV9A0A0B4J1U6 114 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 SCO2A0A1W2PP80 73 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 GRIFINA4D1Z8 144 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 FAM166BA8MTA8 275 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 K7ERU9 68 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 RRHO14718 337 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 RBMXL2O75526 392 aaKnown RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 TNFSF15O95150 251 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 CRISP2P16562 243 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms