RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CGAP01215 116 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 ZNF718Q3SXZ3 478 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 TMEM178AQ8NBL3 297 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 OR10G8Q8NGN5 311 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 TBX15Q96SF7 602 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 NAV3Q8IVL0 2385 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 RIF1Q5UIP0 2472 aaKnown RBP16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 HPRT1P00492 218 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 IL6RP08887 468 aaPredicted RBP16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 IER3P46695 156 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 PDLIM4P50479 330 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 IQCJQ1A5X6 159 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 ARSJQ5FYB0 599 aaPredicted RBP16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 PRR31Q5SQ13 230 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 TOMM20LQ6UXN7 152 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 FDCSPQ8NFU4 85 aa16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 FAM103A1Q9BTL3 118 aaKnown RBP16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 POLR3KQ9Y2Y1 108 aaPredicted RBP16.17■□□□□ 0.18
CNEP1R1-203ENST00000458059 K7EN84 100 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 IGFBP2P18065 325 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 SPCS3P61009 180 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 KIAA1644Q3SXP7 199 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 STPG3Q8N7X2 389 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 PRO3102Q9H379 93 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 TNFSF10P50591 281 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 RELBQ01201 579 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 FXYD3Q14802 87 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 MLANAQ16655 118 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 ZNF705AQ6ZN79 300 aaPredicted RBP16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 LRFN3Q9BTN0 628 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 SNHG12Q9BXW3 62 aa16.16■□□□□ 0.18
CNEP1R1-203ENST00000458059 KALRNO60229 2985 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 TCAPO15273 167 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 OR10J4P0C629 311 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 LYG1Q8N1E2 194 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 C1orf159Q96HA4 380 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 RYDENQ9NUL5 291 aaKnown RBP16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 CLCF1Q9UBD9 225 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 CDX4O14627 284 aaPredicted RBP16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 TYMSP04818 313 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 MIR17HGQ75NE6 70 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 TMEM144Q7Z5S9 345 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 CMTM2Q8TAZ6 248 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 NOL4LQ96MY1 436 aaPredicted RBP16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 GCM1Q9NP62 436 aa16.15■□□□□ 0.18
CNEP1R1-203ENST00000458059 IGHV2OR16-5A0A0B4J2B6 119 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 IGKV3-15P01624 115 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 STAG3L2P0CL84 134 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 STAG3L3P0CL85 134 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 VDAC2P45880 294 aaPredicted RBP16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 EFNB3Q15768 340 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 BATFQ16520 125 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 DOLPP1Q86YN1 238 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 SNRNP40Q96DI7 357 aaKnown RBP16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 OR2V2Q96R30 315 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 IER2Q9BTL4 223 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 NAGKQ9UJ70 344 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 TACC2O95359 2948 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 IGHV1-18A0A0C4DH31 117 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 GCHFRP30047 84 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 CASP6P55212 293 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 IFI27L2Q9H2X8 130 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 CXorf1O96002 111 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 CA2P00918 260 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 OPRK1P41145 380 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 ERVFC1-1P60608 527 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 SSTP61278 116 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 KRTCAP3Q53RY4 240 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 NHLRC2Q8NBF2 726 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 PAM16Q9Y3D7 125 aa16.14■□□□□ 0.17
CNEP1R1-203ENST00000458059 SERF1AO75920 110 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 IGHV3-48P01763 117 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 ADH4P08319 380 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 CDKN1AP38936 164 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 RAB4BP61018 213 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 LCN2P80188 198 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 DNLZQ5SXM8 178 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 GCSAMQ8N6F7 178 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 FCN1O00602 326 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 DBX2Q6ZNG2 339 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 BAGE3Q86Y29 109 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 BAGE2Q86Y30 109 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 OR8I2Q8N0Y5 310 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 C2orf88Q9BSF0 95 aa16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 MRPL18Q9H0U6 180 aaKnown RBP16.13■□□□□ 0.17
CNEP1R1-203ENST00000458059 M0R1B8 84 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 TMPRSS2O15393 492 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 NPY1RP25929 384 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 PSG5Q15238 335 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 OR1L6Q8NGR2 347 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 RND1Q92730 232 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 HSPB9Q9BQS6 159 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 RNASE7Q9H1E1 156 aaKnown RBP16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 TP53TG3Q9ULZ0 132 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 J3QW42 95 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 CRYBB3P26998 211 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 OR4A47Q6IF82 309 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 DIRC2Q96SL1 478 aa16.12■□□□□ 0.17
CNEP1R1-203ENST00000458059 TMEM265A0A087WTH1 108 aa16.11■□□□□ 0.17
CNEP1R1-203ENST00000458059 SAA2-SAA4A0A096LPE2 208 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms