RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 VKORC1L1Q8N0U8 176 aa11.11□□□□□ -0.63
SF3B4-202ENST00000457312 E9PI62 339 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 CD5P06127 495 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 CD2P06729 351 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 ZNF688P0C7X2 276 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 RAP2AP10114 183 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 GNB3P16520 340 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 GNRHRP30968 328 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 FGF9P31371 208 aaPredicted RBP11.1□□□□□ -0.63
SF3B4-202ENST00000457312 DUTP33316 252 aaKnown RBP11.1□□□□□ -0.63
SF3B4-202ENST00000457312 OR2B8PP59922 312 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 KRTAP10-4P60372 401 aaPredicted RBP11.1□□□□□ -0.63
SF3B4-202ENST00000457312 AWAT2Q6E213 333 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 OR6M1Q8NGM8 313 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 DNAJC9Q8WXX5 260 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 ST8SIA2Q92186 375 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 DGCR14Q96DF8 476 aaKnown RBP11.1□□□□□ -0.63
SF3B4-202ENST00000457312 CMTM5Q96DZ9 223 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 RNF125Q96EQ8 232 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 OR51E2Q9H255 320 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 RABAC1Q9UI14 185 aa11.1□□□□□ -0.63
SF3B4-202ENST00000457312 YTHDF2Q9Y5A9 579 aaKnown RBP11.1□□□□□ -0.63
SF3B4-202ENST00000457312 TRBV6-6A0A0A6YYG2 114 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 GNGT2O14610 69 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 ALDH3B2P48448 385 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 TMED1Q13445 227 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 CLINT1Q14677 625 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 GRAMD2BQ96HH9 432 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 HDHD3Q9BSH5 251 aaPredicted RBP11.09□□□□□ -0.63
SF3B4-202ENST00000457312 UPK3BQ9BT76 320 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 FAM30AQ9NZY2 134 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 THYN1Q9P016 225 aa11.09□□□□□ -0.63
SF3B4-202ENST00000457312 TRAV14DV4A0A0A6YYC5 116 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 K7EQG2 157 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 ST8SIA3O43173 380 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 FAM107AO95990 144 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 OR2G6Q5TZ20 316 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 LRRTM1Q86UE6 522 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 CBR4Q8N4T8 237 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 TMEM167AQ8TBQ9 72 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 ADTRPQ96IZ2 230 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 ATP6V0BQ99437 205 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 VSIRQ9H7M9 311 aa11.08□□□□□ -0.64
SF3B4-202ENST00000457312 IGHV3-21A0A0B4J1V1 117 aa11.07□□□□□ -0.64
SF3B4-202ENST00000457312 IGLC7A0M8Q6 106 aa11.07□□□□□ -0.64
SF3B4-202ENST00000457312 IGFBP3P17936 291 aaPredicted RBP11.07□□□□□ -0.64
SF3B4-202ENST00000457312 PUSL1Q8N0Z8 303 aaKnown RBP11.07□□□□□ -0.64
SF3B4-202ENST00000457312 JAGN1Q8N5M9 183 aa11.07□□□□□ -0.64
SF3B4-202ENST00000457312 DUSP18Q8NEJ0 188 aa11.07□□□□□ -0.64
SF3B4-202ENST00000457312 C21orf62Q9NYP8 219 aa11.07□□□□□ -0.64
SF3B4-202ENST00000457312 HSF4Q9ULV5 492 aa11.07□□□□□ -0.64
SF3B4-202ENST00000457312 IGHV3OR16-12A0A075B7B8 117 aa11.06□□□□□ -0.64
SF3B4-202ENST00000457312 APOHP02749 345 aaPredicted RBP11.06□□□□□ -0.64
SF3B4-202ENST00000457312 DAPP51397 102 aa11.06□□□□□ -0.64
SF3B4-202ENST00000457312 RPL11P62913 178 aaKnown RBP11.06□□□□□ -0.64
SF3B4-202ENST00000457312 UBAC2Q8NBM4 344 aa11.06□□□□□ -0.64
SF3B4-202ENST00000457312 GPR148Q8TDV2 347 aa11.06□□□□□ -0.64
SF3B4-202ENST00000457312 IMPAD1Q9NX62 359 aa11.06□□□□□ -0.64
SF3B4-202ENST00000457312 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
SF3B4-202ENST00000457312 YIF1AO95070 293 aa11.05□□□□□ -0.64
SF3B4-202ENST00000457312 CTSGP08311 255 aa11.05□□□□□ -0.64
SF3B4-202ENST00000457312 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
SF3B4-202ENST00000457312 TM2D1Q9BX74 207 aa11.05□□□□□ -0.64
SF3B4-202ENST00000457312 LOC102723971A0A1B0GUV8 181 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 FCGR3BO75015 233 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 EIF4EP06730 217 aaKnown RBP11.04□□□□□ -0.64
SF3B4-202ENST00000457312 CD3GP09693 182 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 MT1HL1P0DM35 61 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 PRDX6P30041 224 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 RELQ04864 619 aaPredicted RBP11.04□□□□□ -0.64
SF3B4-202ENST00000457312 SYS1Q8N2H4 156 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 RFKQ969G6 155 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 UHRF2Q96PU4 802 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 RAB40CQ96S21 281 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 DCUN1D5Q9BTE7 237 aa11.04□□□□□ -0.64
SF3B4-202ENST00000457312 TRAV8-7A0A075B6U6 113 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 F5H768 121 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 RPL8P62917 257 aaKnown RBP11.03□□□□□ -0.64
SF3B4-202ENST00000457312 KIR3DS1Q14943 382 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 Q56UQ5 140 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 DHFR2Q86XF0 187 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 ADGRG5Q8IZF4 528 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 ACBD7Q8N6N7 88 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 SCARB1Q8WTV0 552 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 MAGT1Q9H0U3 335 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 MGAT4AQ9UM21 535 aa11.03□□□□□ -0.64
SF3B4-202ENST00000457312 RAB27BO00194 218 aa11.02□□□□□ -0.65
SF3B4-202ENST00000457312 CRHBPP24387 322 aa11.02□□□□□ -0.65
SF3B4-202ENST00000457312 OR2B11Q5JQS5 317 aa11.02□□□□□ -0.65
SF3B4-202ENST00000457312 DEFB107AQ8IZN7 70 aa11.02□□□□□ -0.65
SF3B4-202ENST00000457312 DCANP1Q8TF63 244 aa11.02□□□□□ -0.65
SF3B4-202ENST00000457312 RIMS4Q9H426 269 aaPredicted RBP11.02□□□□□ -0.65
SF3B4-202ENST00000457312 AK3Q9UIJ7 227 aa11.02□□□□□ -0.65
SF3B4-202ENST00000457312 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
SF3B4-202ENST00000457312 K7EIM0 57 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms