RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 NANOS1Q8WY41 292 aaKnown RBP11.35□□□□□ -0.59
TOP3B-213ENST00000457179 BCL2L2Q92843 193 aaPredicted RBP11.35□□□□□ -0.59
TOP3B-213ENST00000457179 LINC00470Q9BZP3 86 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 BET1LQ9NYM9 111 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 WDR1O75083 606 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 KIR2DL2P43627 348 aaPredicted RBP11.35□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF83P51522 516 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 KIAA1644Q3SXP7 199 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 SCNM1Q9BWG6 230 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF391Q9UJN7 358 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 USF3Q68DE3 2245 aa11.35□□□□□ -0.59
TOP3B-213ENST00000457179 SLC17A3O00476 420 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 SFRP2Q96HF1 295 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 CLDN1O95832 211 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 FGF12P61328 243 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 RPL19P84098 196 aaKnown RBP11.34□□□□□ -0.59
TOP3B-213ENST00000457179 CEACAM21Q3KPI0 293 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 TPRX1Q8N7U7 411 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 SPSB4Q96A44 273 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 NRN1Q9NPD7 142 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 CENPEQ02224 2701 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 IGHV2OR16-5A0A0B4J2B6 119 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 CTXND1A0A1B0GTU2 59 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 PGLYRP1O75594 196 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-213ENST00000457179 VENTXO95231 258 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 KRASP01116 189 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 NTF3P20783 257 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 MPV17P39210 176 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 CTRLP40313 264 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 GNB1P62873 340 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 COLCA1Q6ZS62 124 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 ZNF596Q8TC21 504 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 OR1A1Q9P1Q5 309 aa11.34□□□□□ -0.59
TOP3B-213ENST00000457179 CLEC18AA5D8T8 446 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 SNURFLB1AK76 121 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 LTC4SQ16873 150 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 CLEC18CQ8NCF0 446 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 OR5D13Q8NGL4 314 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 IL36GQ9NZH8 169 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 PPP1R3CQ9UQK1 317 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 IGHV2-70DA0A0C4DH43 119 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 WNT9BO14905 357 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 TOMM40O96008 361 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 IGHV3-13P01766 116 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 IGHV3-7P01780 117 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 TNFSF4P23510 183 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 TSPOP30536 169 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 MRPL49Q13405 166 aaKnown RBP11.33□□□□□ -0.6
TOP3B-213ENST00000457179 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 FAM19A2Q8N3H0 131 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 Q8NFD4 153 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 TP73-AS1Q9UF72 201 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 RALYQ9UKM9 306 aaKnown RBP11.33□□□□□ -0.6
TOP3B-213ENST00000457179 KCNS2Q9ULS6 477 aa11.33□□□□□ -0.6
TOP3B-213ENST00000457179 A0A1W2PN81 502 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 PSG1P11464 419 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 F2RP25116 425 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 PRAMEF6Q5VXH4 476 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 FAM53AQ6NSI3 398 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-213ENST00000457179 Q8N976 141 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 GNB4Q9HAV0 340 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 CACNA1BQ00975 2339 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 H0Y980 276 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 MLNRO43193 412 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 TIMM8AO60220 97 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-213ENST00000457179 SLC35B1P78383 322 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 PSG7Q13046 419 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 KRTCAP3Q53RY4 240 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 OR5P3Q8WZ94 311 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 CST9LQ9H4G1 147 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 SLC35D1Q9NTN3 355 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 M0R1B8 84 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 GPX1P07203 203 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 TFF3Q07654 80 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 FOXL1Q12952 345 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 OCIAD2Q56VL3 154 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 NUDT11Q96G61 164 aa11.32□□□□□ -0.6
TOP3B-213ENST00000457179 TRAV24A0A0B4J272 114 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 PPBPP02775 128 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 RIPPLY3P57055 190 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 GABRA6Q16445 453 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 Q6ZT83 130 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 FAM58AQ8N1B3 248 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 KLF14Q8TD94 323 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-213ENST00000457179 RCHY1Q96PM5 261 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 CLCF1Q9UBD9 225 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 FAM87AP0C7U9 286 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 YPEL3P61236 119 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-213ENST00000457179 GNG3P63215 75 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 ACSF3Q4G176 576 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-213ENST00000457179 PROCRQ9UNN8 238 aa11.31□□□□□ -0.6
TOP3B-213ENST00000457179 ODAMA1E959 279 aa11.3□□□□□ -0.6
TOP3B-213ENST00000457179 DPRXA6NFQ7 191 aa11.3□□□□□ -0.6
TOP3B-213ENST00000457179 DEGS1O15121 323 aa11.3□□□□□ -0.6
TOP3B-213ENST00000457179 SMPD2O60906 423 aa11.3□□□□□ -0.6
TOP3B-213ENST00000457179 ZNF253O75346 499 aa11.3□□□□□ -0.6
TOP3B-213ENST00000457179 FAM27E3Q08E93 113 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms