RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 C1orf162Q8NEQ5 155 aaPredicted RBP11.87□□□□□ -0.51
RAPGEF3-205ENST00000449771 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
RAPGEF3-205ENST00000449771 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
RAPGEF3-205ENST00000449771 CIRBPQ14011 172 aaKnown RBP11.87□□□□□ -0.51
RAPGEF3-205ENST00000449771 FAM216BQ8N7L0 139 aa11.87□□□□□ -0.51
RAPGEF3-205ENST00000449771 SLC25A38Q96DW6 304 aa11.87□□□□□ -0.51
RAPGEF3-205ENST00000449771 IGHV1-2P23083 117 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 EMP1P54849 157 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 A0A0G2JLM5 398 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 SMIM8Q96KF7 97 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 C5orf66Q9H5L9 145 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 KNL1Q8NG31 2342 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 TM4SF5O14894 197 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 SPSB4Q96A44 273 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 TMEM187Q14656 261 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 CYP2G1PQ6ZSU1 146 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 C19orf24Q9BVV8 132 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 HOXA5P20719 270 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 COPS9Q8WXC6 57 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 MRAP2Q96G30 205 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 CASP8AP2Q9UKL3 1982 aa11.86□□□□□ -0.51
RAPGEF3-205ENST00000449771 EFEMP2O95967 443 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 MBD3L1Q8WWY6 194 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 PARLQ9H300 379 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 ARPC1AQ92747 370 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 NUDT11Q96G61 164 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 PIN1P1O15428 100 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 SCGB1A1P11684 91 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 LTBRP36941 435 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 RPS11P62280 158 aaKnown RBP eCLIP11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 C9orf106Q8NAJ2 232 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 OR10S1Q8NGN2 331 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 RNASE6Q93091 150 aaKnown RBP11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 SH3BGRL3Q9H299 93 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 ARFGEF1Q9Y6D6 1849 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 LOC107984156A0A0G2JMH3 177 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 PSMB11A5LHX3 300 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 H0YL77 283 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 TMEM136Q6ZRR5 245 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 ARL17AQ8IVW1 177 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 WDYHV1Q96HA8 205 aa11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 SOX21Q9Y651 276 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF3-205ENST00000449771 PRSS2P07478 247 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 VDAC2P45880 294 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 HTN3P15516 51 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 CLEC19AQ6UXS0 136 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 CLDND2Q8NHS1 167 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 RARRES2Q99969 163 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 DERL1Q9BUN8 251 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 LY6DQ14210 128 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 LINC01590Q5TEZ4 76 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 TCF24Q7RTU0 167 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 PCM1Q15154 2024 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 COL11A1P12107 1806 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 NPIPB13A6NJU9 1138 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 NPIPB4C9JG80 1138 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 COLCA1Q6ZS62 124 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 HIST1H4GQ99525 98 aa11.84□□□□□ -0.51
RAPGEF3-205ENST00000449771 UBE2CO00762 179 aa11.83□□□□□ -0.51
RAPGEF3-205ENST00000449771 GPR183P32249 361 aa11.83□□□□□ -0.51
RAPGEF3-205ENST00000449771 PEMTQ9UBM1 199 aa11.83□□□□□ -0.51
RAPGEF3-205ENST00000449771 SUMO2P61956 95 aaKnown RBP11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 LEPROTL1O95214 131 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 POC1AQ8NBT0 407 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 MRPS16Q9Y3D3 137 aaKnown RBP11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 TMEM14DPA8MWL7 114 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 UCP3P55916 312 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 ICAM4Q14773 271 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 GCSAMLQ5JQS6 135 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 C7orf71A4D174 169 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 C12orf77C9JDV5 145 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 FHITP49789 147 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 FAM131CQ96AQ9 280 aa11.83□□□□□ -0.52
RAPGEF3-205ENST00000449771 TRBV20OR9-2A0A075B6H5 130 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 CELA3BP08861 270 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 ATOH7Q8N100 152 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 RRHO14718 337 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 IGLV3-19P01714 112 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 ZNF506Q5JVG8 444 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 ZIC4Q8N9L1 334 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 KBTBD11-OT1A0A1B0GTJ5 212 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 C17orf100A8MU93 164 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 IL6RP08887 468 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 ASIPP42127 132 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 OR13A1Q8NGR1 328 aa11.82□□□□□ -0.52
RAPGEF3-205ENST00000449771 OR13C6PQ8NH95 151 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms