RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 VPREB3Q9UKI3 123 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 MOB4Q9Y3A3 225 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 ACANP16112 2415 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 CSPG4Q6UVK1 2322 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 TRAV3A0A0B4J244 114 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 CRLF1O75462 422 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 SIX6O95475 246 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 FGF2P09038 288 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 SMCO1Q147U7 214 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 C5orf64Q2M2E5 130 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 RBMS3Q6XE24 437 aaKnown RBP11.19□□□□□ -0.62
SHMT2-203ENST00000449049 FOXRED2Q8IWF2 684 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 CACNG5Q9UF02 275 aa11.19□□□□□ -0.62
SHMT2-203ENST00000449049 C13orf42A0A1B0GVH6 325 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 C5orf51A6NDU8 294 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
SHMT2-203ENST00000449049 FGF16O43320 207 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 PITX3O75364 302 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 FAM157CP0CG43 387 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 ATF4P18848 351 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-203ENST00000449049 SRSF4Q08170 494 aaKnown RBP11.18□□□□□ -0.62
SHMT2-203ENST00000449049 IAH1Q2TAA2 248 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-203ENST00000449049 AARDQ4LEZ3 155 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 PPP1R27Q86WC6 154 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 C2orf50Q96LR7 162 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 HIVEP1P15822 2718 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 RPS10-NUDT3A0A1W2PQS6 291 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 PCP4L1A6NKN8 68 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 C15orf61A6NNL5 157 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 CHST1O43916 411 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 PRSS8Q16651 343 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 COMMD7Q86VX2 200 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 C5orf56Q8N8D9 126 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 OR11H4Q8NGC9 324 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 ZNF430Q9H8G1 570 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-203ENST00000449049 FOXA2Q9Y261 457 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-203ENST00000449049 NSG2Q9Y328 171 aa11.18□□□□□ -0.62
SHMT2-203ENST00000449049 SNAPC5O75971 98 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 IFNA7P01567 189 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 OR2B8PP59922 312 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 PLGLAQ15195 96 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 ZNF429Q86V71 674 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 MMD2Q8IY49 270 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 OR4A16Q8NH70 328 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 ZNF436Q9C0F3 470 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-203ENST00000449049 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-203ENST00000449049 TMEM14BQ9NUH8 114 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 PRNDQ9UKY0 176 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 M0QZK8 103 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 AMY1AP04745 511 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 RPL8P62917 257 aaKnown RBP11.17□□□□□ -0.62
SHMT2-203ENST00000449049 PJVKQ0ZLH3 352 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 IL15RAQ13261 267 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-203ENST00000449049 ASB13Q8WXK3 278 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 PDCD10Q9BUL8 212 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 NMES1Q9C002 83 aa11.17□□□□□ -0.62
SHMT2-203ENST00000449049 DNAJC9-AS1A6NH13 148 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 CLDN34H7C241 214 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 FCN1O00602 326 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 HLA-DRB1P01911 266 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 MAS1LP35410 378 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-203ENST00000449049 OR1S1Q8NH92 325 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 ZNF418Q8TF45 676 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-203ENST00000449049 RASL11BQ9BPW5 248 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 QTRT1Q9BXR0 403 aaKnown RBP11.16□□□□□ -0.62
SHMT2-203ENST00000449049 CHIAQ9BZP6 476 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 ESM1Q9NQ30 184 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 TNFRSF19Q9NS68 423 aa11.16□□□□□ -0.62
SHMT2-203ENST00000449049 ST8SIA3O43173 380 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 GIPP09681 153 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-203ENST00000449049 CYCSP99999 105 aaKnown RBP11.15□□□□□ -0.62
SHMT2-203ENST00000449049 EXOSC2Q13868 293 aaKnown RBP11.15□□□□□ -0.62
SHMT2-203ENST00000449049 LGALSLQ3ZCW2 172 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-203ENST00000449049 PDLIM3Q53GG5 364 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-203ENST00000449049 LINC00518Q8N0U6 118 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 WDR89Q96FK6 387 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-203ENST00000449049 CLCC1Q96S66 551 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 FKBP11Q9NYL4 201 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 UBQLN2Q9UHD9 624 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 ZNF257Q9Y2Q1 563 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 FAM90A26D6RGX4 464 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 RBMXL2O75526 392 aaKnown RBP11.15□□□□□ -0.62
SHMT2-203ENST00000449049 CA2P00918 260 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 HILS1P60008 231 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 OR52E5Q8NH55 327 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 GSKIPQ9P0R6 139 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 CACFD1Q9UGQ2 172 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 OR51B2Q9Y5P1 312 aa11.15□□□□□ -0.62
SHMT2-203ENST00000449049 MPC2O95563 127 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 MYOD1P15172 320 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 COMPP49747 757 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-203ENST00000449049 ID3Q02535 119 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 TNXAQ16473 311 aa11.14□□□□□ -0.63
SHMT2-203ENST00000449049 OR5B3Q8NH48 314 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms