RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 HAND1O96004 215 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 CGAP01215 116 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 CA6P23280 308 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 GPR183P32249 361 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 GPR6P46095 362 aaPredicted RBP7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 NFAM1Q8NET5 270 aaPredicted RBP7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 RNF138Q8WVD3 245 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 MGST2Q99735 147 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 GGTLC1Q9BX51 225 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 WDR54Q9H977 334 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 PRDM6Q9NQX0 595 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 FER1L5A0AVI2 2057 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 LILRA5A6NI73 299 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 C9orf172C9J069 976 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 RPL30P62888 115 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 CEACAM21Q3KPI0 293 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 TSTD1Q8NFU3 115 aa7.84□□□□□ -1.15
SYNPO2-204ENST00000448416 SH2D7A6NKC9 451 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 CDIPTO14735 213 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 NEURL1O76050 574 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 ANKRD37Q7Z713 158 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 SSBP3Q9BWW4 388 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 GCM1Q9NP62 436 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 ABI3Q9P2A4 366 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 KMT2EQ8IZD2 1858 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 CACNA1DQ01668 2161 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 SYS1-DBNDD2H3BUS1 97 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 P0C879 139 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 CATR1Q13166 79 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 UFSP1Q6NVU6 142 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 CPT1CQ8TCG5 803 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 COL8A2P25067 703 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 CCR5P51681 352 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 PCBD1P61457 104 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 EFNB3Q15768 340 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 MRPL21Q7Z2W9 205 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 LINC00596Q86U02 117 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 MED12LQ86YW9 2145 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 FOXB1Q99853 325 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 MS4A5Q9H3V2 200 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 EML6Q6ZMW3 1958 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 ASXL3Q9C0F0 2248 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 PTPRSQ13332 1948 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 A0A1B0GV72 72 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 C17orf98A8MV24 154 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 NTF4P34130 210 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 UQCRFS1P47985 274 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 KLF5Q13887 457 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 CEACAM16Q2WEN9 425 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 KRTAP27-1Q3LI81 207 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 CHRNA10Q9GZZ6 450 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 NPVFQ9HCQ7 196 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 SCRT2Q9NQ03 307 aa7.83□□□□□ -1.16
SYNPO2-204ENST00000448416 TMEM265A0A087WTH1 108 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 CAMPP49913 170 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 PLP1P60201 277 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 PRSS57Q6UWY2 283 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 MOB1BQ7L9L4 216 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 TRIB1Q96RU8 372 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 SSBP4Q9BWG4 385 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 H0Y8G0 127 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 ZFAND5O76080 213 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 LEPROTL1O95214 131 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 IGHV4-34P06331 123 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 AREGP15514 252 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 HTR1DP28221 377 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 PSG5Q15238 335 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 ZNF645Q8N7E2 425 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 C1QTNF5Q9BXJ0 243 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 HEYLQ9NQ87 328 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 HLA-DRB1P01911 266 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 REG1BP48304 166 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 RNFT1Q5M7Z0 435 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 LINC00173Q6ZV60 143 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 CDH23Q9H251 3354 aa7.82□□□□□ -1.16
SYNPO2-204ENST00000448416 H3BUT2 72 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 CRXO43186 299 aaPredicted RBP7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 SNAI2O43623 268 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 ACTL6BO94805 426 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 HBZP02008 142 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 SEC11AP67812 179 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 AAED1Q7RTV5 226 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 BPIFA4PQ86YQ2 179 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 TMEM251Q8N6I4 163 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 FADS6Q8N9I5 356 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 FAM168AQ92567 244 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 NAA38Q9BRA0 125 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 SRFP11831 508 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 AZU1P20160 251 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 SMAGPQ0VAQ4 97 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 TMEM97Q5BJF2 176 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 PARM1Q6UWI2 310 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 NEGR1Q7Z3B1 354 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 NHLRC2Q8NBF2 726 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 SPACA9Q96E40 222 aaPredicted RBP7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 MCRIP2Q9BUT9 160 aaKnown RBP7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
SYNPO2-204ENST00000448416 SDK2Q58EX2 2172 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms