RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ZNF320A2RRD8 509 aa21.26■□□□□ 0.99
CBX4-202ENST00000448310 HLA-GP17693 338 aa21.26■□□□□ 0.99
CBX4-202ENST00000448310 TIMM50Q3ZCQ8 353 aa21.26■□□□□ 0.99
CBX4-202ENST00000448310 SPAG16Q8N0X2 631 aa21.26■□□□□ 0.99
CBX4-202ENST00000448310 HRASLSQ9HDD0 168 aa21.26■□□□□ 0.99
CBX4-202ENST00000448310 TMEM213A2RRL7 107 aa21.25■□□□□ 0.99
CBX4-202ENST00000448310 MFSD2BA6NFX1 497 aa21.25■□□□□ 0.99
CBX4-202ENST00000448310 DHFRP00374 187 aa21.25■□□□□ 0.99
CBX4-202ENST00000448310 IDNKQ5T6J7 187 aa21.25■□□□□ 0.99
CBX4-202ENST00000448310 HOGA1Q86XE5 327 aa21.25■□□□□ 0.99
CBX4-202ENST00000448310 TMEM61Q8N0U2 210 aa21.25■□□□□ 0.99
CBX4-202ENST00000448310 BET1LQ9NYM9 111 aa21.25■□□□□ 0.99
CBX4-202ENST00000448310 MLXQ9UH92 298 aa21.25■□□□□ 0.99
CBX4-202ENST00000448310 SULT1C2O00338 296 aa21.24■□□□□ 0.99
CBX4-202ENST00000448310 PPYP01298 95 aa21.24■□□□□ 0.99
CBX4-202ENST00000448310 DEFA4P12838 97 aa21.24■□□□□ 0.99
CBX4-202ENST00000448310 FXYD4P59646 89 aa21.24■□□□□ 0.99
CBX4-202ENST00000448310 SLC5A7Q9GZV3 580 aa21.24■□□□□ 0.99
CBX4-202ENST00000448310 IGLV11-55A0A075B6I3 123 aa21.23■□□□□ 0.99
CBX4-202ENST00000448310 TRAV3A0A0B4J244 114 aa21.23■□□□□ 0.99
CBX4-202ENST00000448310 LOC100506127A0A0U1RQW1 187 aa21.23■□□□□ 0.99
CBX4-202ENST00000448310 HIST1H1BP16401 226 aaKnown RBP21.23■□□□□ 0.99
CBX4-202ENST00000448310 KLK9Q2XQG4 91 aa21.23■□□□□ 0.99
CBX4-202ENST00000448310 FAM106AQ4KMX7 169 aa21.23■□□□□ 0.99
CBX4-202ENST00000448310 ZNF57Q68EA5 555 aaPredicted RBP21.23■□□□□ 0.99
CBX4-202ENST00000448310 ZNF773Q6PK81 442 aa21.23■□□□□ 0.99
CBX4-202ENST00000448310 KLK9Q9UKQ9 250 aa21.23■□□□□ 0.99
CBX4-202ENST00000448310 ETV7Q9Y603 341 aa21.23■□□□□ 0.99
CBX4-202ENST00000448310 OR2B8PP59922 312 aa21.22■□□□□ 0.99
CBX4-202ENST00000448310 MSMO1Q15800 293 aa21.22■□□□□ 0.99
CBX4-202ENST00000448310 UXS1Q8NBZ7 420 aa21.22■□□□□ 0.99
CBX4-202ENST00000448310 OR4A5Q8NH83 315 aa21.22■□□□□ 0.99
CBX4-202ENST00000448310 A8MWP6 167 aa21.21■□□□□ 0.99
CBX4-202ENST00000448310 SCAF4O95104 1147 aaKnown RBP21.21■□□□□ 0.99
CBX4-202ENST00000448310 CLEC3BP05452 202 aa21.21■□□□□ 0.99
CBX4-202ENST00000448310 TM4SF20Q53R12 229 aa21.21■□□□□ 0.99
CBX4-202ENST00000448310 UNQ9165/PRO28630Q6UXU0 137 aa21.21■□□□□ 0.99
CBX4-202ENST00000448310 SLC16A13Q7RTY0 426 aa21.21■□□□□ 0.99
CBX4-202ENST00000448310 ZBTB34Q8NCN2 500 aa21.21■□□□□ 0.99
CBX4-202ENST00000448310 AUNIPQ9H7T9 357 aa21.21■□□□□ 0.99
CBX4-202ENST00000448310 ALMS1Q8TCU4 4167 aa21.2■□□□□ 0.98
CBX4-202ENST00000448310 MEIS3P1A6NDR6 274 aa21.2■□□□□ 0.98
CBX4-202ENST00000448310 RBFOX2O43251 390 aaKnown RBP eCLIP21.2■□□□□ 0.986e-7■■■■□ 23.2
CBX4-202ENST00000448310 SCAND1P57086 179 aa21.2■□□□□ 0.98
CBX4-202ENST00000448310 BTNL8Q6UX41 500 aa21.2■□□□□ 0.98
CBX4-202ENST00000448310 IGLC7A0M8Q6 106 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 UPK2O00526 184 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 ATP6V1G2O95670 118 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 GPR183P32249 361 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 TAS2R31P59538 309 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 CATR1Q13166 79 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 ZNF818PQ6ZRF7 136 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 TMEM17Q86X19 198 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 OR52B4Q8NGK2 314 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 OR51H1Q8NH63 302 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 IL17DQ8TAD2 202 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 CXorf58Q96LI9 332 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 AIFM2Q9BRQ8 373 aa21.19■□□□□ 0.98
CBX4-202ENST00000448310 TRBV7-1A0A0A6YYK4 115 aa21.18■□□□□ 0.98
CBX4-202ENST00000448310 IGHV3-35A0A0C4DH35 117 aa21.18■□□□□ 0.98
CBX4-202ENST00000448310 HPRT1P00492 218 aa21.18■□□□□ 0.98
CBX4-202ENST00000448310 RPA2P15927 270 aa21.18■□□□□ 0.98
CBX4-202ENST00000448310 YTHDF1Q9BYJ9 559 aaKnown RBP21.18■□□□□ 0.98
CBX4-202ENST00000448310 Q9H521 79 aa21.18■□□□□ 0.98
CBX4-202ENST00000448310 TMEM140Q9NV12 185 aa21.18■□□□□ 0.98
CBX4-202ENST00000448310 A0A0A6YYH2 397 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 A6NJ64 397 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 JTBO76095 146 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 S1PR2O95136 353 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 NQO2P16083 231 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 POU2AF1Q16633 256 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 OR10W1Q8NGF6 305 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 ZNF502Q8TBZ5 544 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 COMMD5Q9GZQ3 224 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 DIABLOQ9NR28 239 aa21.17■□□□□ 0.98
CBX4-202ENST00000448310 NEDD8Q15843 81 aa21.16■□□□□ 0.98
CBX4-202ENST00000448310 AADACL3Q5VUY0 350 aa21.16■□□□□ 0.98
CBX4-202ENST00000448310 DMBX1Q8NFW5 382 aa21.16■□□□□ 0.98
CBX4-202ENST00000448310 OR5AP2Q8NGF4 316 aa21.16■□□□□ 0.98
CBX4-202ENST00000448310 ZNF585BQ52M93 769 aa21.15■□□□□ 0.98
CBX4-202ENST00000448310 GIMAP1Q8WWP7 306 aa21.15■□□□□ 0.98
CBX4-202ENST00000448310 PLET1Q6UQ28 207 aa21.14■□□□□ 0.97
CBX4-202ENST00000448310 GGTLC1Q9BX51 225 aa21.14■□□□□ 0.97
CBX4-202ENST00000448310 QTRT1Q9BXR0 403 aaKnown RBP21.14■□□□□ 0.97
CBX4-202ENST00000448310 CBX5P45973 191 aa21.13■□□□□ 0.97
CBX4-202ENST00000448310 HERV-K104P61576 105 aa21.13■□□□□ 0.97
CBX4-202ENST00000448310 PLEKHA2Q9HB19 425 aa21.13■□□□□ 0.97
CBX4-202ENST00000448310 C8orf88P0DMB2 117 aa21.12■□□□□ 0.97
CBX4-202ENST00000448310 PTBP1P26599 531 aaKnown RBP eCLIP21.12■□□□□ 0.97
CBX4-202ENST00000448310 GNRHRP30968 328 aa21.12■□□□□ 0.97
CBX4-202ENST00000448310 TGFBR1P36897 503 aa21.12■□□□□ 0.97
CBX4-202ENST00000448310 ANKRD55Q3KP44 614 aa21.12■□□□□ 0.97
CBX4-202ENST00000448310 SRSF8Q9BRL6 282 aaKnown RBP21.12■□□□□ 0.97
CBX4-202ENST00000448310 IFT46Q9NQC8 304 aa21.12■□□□□ 0.97
CBX4-202ENST00000448310 EHFQ9NZC4 300 aa21.12■□□□□ 0.97
CBX4-202ENST00000448310 THYN1Q9P016 225 aa21.12■□□□□ 0.97
CBX4-202ENST00000448310 LOC102724200A0A096LPH7 203 aaPredicted RBP21.11■□□□□ 0.97
CBX4-202ENST00000448310 OR13C7P0DN81 318 aa21.11■□□□□ 0.97
CBX4-202ENST00000448310 RBPMS2Q6ZRY4 209 aaKnown RBP21.11■□□□□ 0.97
CBX4-202ENST00000448310 CD300LFQ8TDQ1 290 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms