RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 IGKV3-15P01624 115 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 GPX1P07203 203 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 BTCP35070 178 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 TNFSF10P50591 281 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 ST6GALNAC3Q8NDV1 305 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 NDUFAF3Q9BU61 184 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 IFI27L2Q9H2X8 130 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 PPIAL4CA0A0B4J2A2 164 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 C12orf77C9JDV5 145 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 RAMP1O60894 148 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 MOSP00540 346 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 PPIAL4GP0DN37 164 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 COX6A1P12074 109 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 PCOLCEQ15113 449 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 LRTM2Q8N967 370 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 PRELID3AQ96N28 172 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 LINC00470Q9BZP3 86 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 TMEM160Q9NX00 188 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 SOX21Q9Y651 276 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-204ENST00000448183 PTPRFP10586 1907 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 A0A1B0GUT8 65 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 C1QTNF9BB2RNN3 333 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 NPIPB11E5RHQ5 1161 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 ICAM4Q14773 271 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 OSR1Q8TAX0 266 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-204ENST00000448183 SPSB2Q99619 263 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 GEMIN7Q9H840 131 aaKnown RBP6.6□□□□□ -1.35
NEDD9-204ENST00000448183 DOCK5Q9H7D0 1870 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 PEX7O00628 323 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 NPPCP23582 126 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 CTSSP25774 331 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 TFF3Q07654 80 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 FAM106AQ4KMX7 169 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 SPRED2Q7Z698 418 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 NR2C2APQ86WQ0 139 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 LINC00469Q8N7U9 141 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 CLEC7AQ9BXN2 247 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 MOB4Q9Y3A3 225 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 ARFGEF1Q9Y6D6 1849 aa6.6□□□□□ -1.35
NEDD9-204ENST00000448183 ZDBF2Q9HCK1 2354 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 A0A1W2PQM1 296 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 ATP5LO75964 103 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 APOHP02749 345 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 ATP5G3P48201 142 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 RPL23P62829 140 aaKnown RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 ZNF324BQ6AW86 544 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 ZNF525Q8N782 197 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 FAM131CQ96AQ9 280 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 MRPS16Q9Y3D3 137 aaKnown RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 ZNF646O15015 1829 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 BRWD3Q6RI45 1802 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 SPTBN1Q01082 2364 aaKnown RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 STAG3L3P0CL85 134 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 TSPOP30536 169 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 MEF2CQ06413 473 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 RRN3P1Q2M238 152 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 RPL39P5Q59GN2 51 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 PEAR1Q5VY43 1037 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 C18orf15Q96N68 181 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 RNF126Q9BV68 326 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 BEX4Q9NWD9 120 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 MRPL16Q9NX20 251 aaKnown RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 A0A1B0GWB2 263 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 C19orf67A6NJJ6 358 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 FOXI3A8MTJ6 420 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 DNAL4O96015 105 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 IGFBP3P17936 291 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-204ENST00000448183 IGFBP2P18065 325 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
NEDD9-204ENST00000448183 IGKV1D-43A0A0B4J1Z2 117 aa6.59□□□□□ -1.36
NEDD9-204ENST00000448183 SYNGR3O43761 229 aa6.59□□□□□ -1.36
NEDD9-204ENST00000448183 ZNF56Q15929 161 aa6.59□□□□□ -1.36
NEDD9-204ENST00000448183 ZNRF1Q8ND25 227 aa6.59□□□□□ -1.36
NEDD9-204ENST00000448183 TMEM170AQ8WVE7 144 aa6.59□□□□□ -1.36
NEDD9-204ENST00000448183 LAMTOR2Q9Y2Q5 125 aa6.59□□□□□ -1.36
NEDD9-204ENST00000448183 TRAV24A0A0B4J272 114 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 C17orf98A8MV24 154 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 PROB1E7EW31 1015 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 NKX2-8O15522 239 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 LY6G6FQ5SQ64 297 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 TMEM170BQ5T4T1 132 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 FAM74A4Q5TZK3 123 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 CLEC2AQ6UVW9 174 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-204ENST00000448183 FBLN5Q9UBX5 448 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 A0A1B0GW15 77 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 F8VVB4 439 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 F8VWA3 439 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 Q6AWC8 147 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 LINC00114Q6XXX2 140 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 TCF23Q7RTU1 214 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 FAM19A2Q8N3H0 131 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 ST6GALNAC6Q969X2 333 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 RPP21Q9H633 154 aaKnown RBP6.58□□□□□ -1.36
NEDD9-204ENST00000448183 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 NRXN2Q9P2S2 1712 aa6.58□□□□□ -1.36
NEDD9-204ENST00000448183 TDRD6O60522 2096 aaKnown RBP6.58□□□□□ -1.36
NEDD9-204ENST00000448183 SCN2AQ99250 2005 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms