RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MALSU1Q96EH3 234 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 IGF2BP2-AS1Q96M15 143 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 LYSMD1Q96S90 227 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 SERPINI1Q99574 410 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 CHST6Q9GZX3 395 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 FAM107BQ9H098 131 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 EFCAB1Q9HAE3 211 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 KLK5Q9Y337 293 aaPredicted RBP2.4□□□□□ -2.03
PMS1-216ENST00000447734 CRB1P82279 1406 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 ATAD5Q96QE3 1844 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 OTOFQ9HC10 1997 aa2.4□□□□□ -2.03
PMS1-216ENST00000447734 NLRC5Q86WI3 1866 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 MYH3P11055 1940 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 DICER1Q9UPY3 1922 aaKnown RBP2.39□□□□□ -2.03
PMS1-216ENST00000447734 IGLV3-16A0A075B6K0 115 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 TRBV19A0A075B6N1 114 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 TRAV4A0A0B4J268 109 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 A0A1W2PRE2 83 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 A8MWP6 167 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 E7EQ34 232 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 ARPC5O15511 151 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 NDUFB2O95178 105 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 G6PCP35575 357 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 RPL27AP46776 148 aaKnown RBP2.39□□□□□ -2.03
PMS1-216ENST00000447734 CSN1S1P47710 185 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 SURF2Q15527 256 aaPredicted RBP2.39□□□□□ -2.03
PMS1-216ENST00000447734 LGALS9BQ3B8N2 356 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 LGALSLQ3ZCW2 172 aaPredicted RBP2.39□□□□□ -2.03
PMS1-216ENST00000447734 SCGB2B2Q4G0G5 96 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 LGALS9CQ6DKI2 356 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 ZNF880Q6PDB4 577 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 Q6ZQT7 251 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 SPATA12Q7Z6I5 190 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 RPRMLQ8N4K4 120 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 KLF14Q8TD94 323 aaPredicted RBP2.39□□□□□ -2.03
PMS1-216ENST00000447734 STARD4Q96DR4 205 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 RMND5BQ96G75 393 aaPredicted RBP2.39□□□□□ -2.03
PMS1-216ENST00000447734 SEC22CQ9BRL7 303 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 MND1Q9BWT6 205 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 RSPO3Q9BXY4 272 aaPredicted RBP2.39□□□□□ -2.03
PMS1-216ENST00000447734 PBOV1Q9GZY1 135 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 C11orf1Q9H5F2 150 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 SPANXA1Q9NS26 97 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 PRR34Q9NV39 138 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 MCTS1Q9ULC4 181 aaKnown RBP2.39□□□□□ -2.03
PMS1-216ENST00000447734 SCN10AQ9Y5Y9 1956 aa2.39□□□□□ -2.03
PMS1-216ENST00000447734 TONSLQ96HA7 1378 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 DHRS12A0PJE2 317 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 ZNF98A6NK75 572 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 RIIAD1A6NNX1 92 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 H3BQ85 93 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 BANF1O75531 89 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 OR2J2O76002 312 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 IGHV3-53P01767 116 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 APOA2P02652 100 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 PRM2P04554 102 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 TFPTP0C1Z6 253 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 ZNF286BP0CG31 522 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 CCL3P10147 92 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 PSMD8P48556 350 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 TAS2R20P59543 309 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 TMEM69Q5SWH9 247 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 RPL22L1Q6P5R6 122 aaKnown RBP2.38□□□□□ -2.03
PMS1-216ENST00000447734 ZNF322Q6U7Q0 402 aaPredicted RBP2.38□□□□□ -2.03
PMS1-216ENST00000447734 TOMM20LQ6UXN7 152 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 SSH2Q76I76 1423 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 MBD3L1Q8WWY6 194 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 C11orf40Q8WZ69 217 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 LZICQ8WZA0 190 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 BORCS5Q969J3 196 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 DNAJC30Q96LL9 226 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 C2orf50Q96LR7 162 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 UPK3BQ9BT76 320 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 EFCAB11Q9BUY7 163 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 CCDC32Q9BV29 185 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 LRTM1Q9HBL6 345 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 MED11Q9P086 117 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 S4R3C0 116 aa2.38□□□□□ -2.03
PMS1-216ENST00000447734 GRIFINA4D1Z8 144 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 J3QRK9 145 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 KPNA4O00629 521 aaPredicted RBP2.37□□□□□ -2.03
PMS1-216ENST00000447734 LY6HO94772 140 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 IFNA10P01566 189 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 OR10J4P0C629 311 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 RPS4Y1P22090 263 aaKnown RBP2.37□□□□□ -2.03
PMS1-216ENST00000447734 HIST1H2BOP23527 126 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 CRHBPP24387 322 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 HIST1H2BBP33778 126 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 EMP1P54849 157 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 PIGPP57054 158 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 KLF3P57682 345 aaPredicted RBP2.37□□□□□ -2.03
PMS1-216ENST00000447734 FXYD7P58549 80 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 HIST1H2BDP58876 126 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 TAS2R30P59541 319 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 HIST1H2BCP62807 126 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 CCL20P78556 96 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 FLI1Q01543 452 aaPredicted RBP2.37□□□□□ -2.03
PMS1-216ENST00000447734 BAMBIQ13145 260 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 HIST2H2BEQ16778 126 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms