RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 TNCP24821 2201 aa11.12□□□□□ -0.63
SREBF1-207ENST00000447641 NBEAL2Q6ZNJ1 2754 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 C1QBP02746 253 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 OR5AC1P0C628 307 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 CD28P10747 220 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 EIF2B2P49770 351 aaKnown RBP11.11□□□□□ -0.63
SREBF1-207ENST00000447641 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
SREBF1-207ENST00000447641 CFHR3Q02985 330 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 THOC7Q6I9Y2 204 aaKnown RBP11.11□□□□□ -0.63
SREBF1-207ENST00000447641 C10orf99Q6UWK7 81 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 FOXRED2Q8IWF2 684 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 STPG2Q8N412 459 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 OR11H7Q8NGC8 314 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 ST6GAL2Q96JF0 529 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 GPHA2Q96T91 129 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 NMES1Q9C002 83 aa11.11□□□□□ -0.63
SREBF1-207ENST00000447641 DBX1A6NMT0 343 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 ADARB2-AS1A8MUL3 147 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 FAM25EA8MYX2 175 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 FBXO24O75426 580 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 EGR2P11161 476 aaPredicted RBP11.1□□□□□ -0.63
SREBF1-207ENST00000447641 UCP1P25874 307 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
SREBF1-207ENST00000447641 CX3CL1P78423 397 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 TMEM187Q14656 261 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 MRGPRG-AS1Q2M3A8 158 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 C19orf54Q5BKX5 351 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 ZNF562Q6V9R5 426 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 OR2T35Q8NGX2 323 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 RNASE11Q8TAA1 199 aaKnown RBP11.1□□□□□ -0.63
SREBF1-207ENST00000447641 OSR1Q8TAX0 266 aaPredicted RBP11.1□□□□□ -0.63
SREBF1-207ENST00000447641 RBPMSQ93062 196 aaKnown RBP11.1□□□□□ -0.63
SREBF1-207ENST00000447641 TMEM56Q96MV1 263 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 METTL1Q9UBP6 276 aaKnown RBP11.1□□□□□ -0.63
SREBF1-207ENST00000447641 TMEM56-RWDD3S4R434 201 aa11.1□□□□□ -0.63
SREBF1-207ENST00000447641 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 SHOXO15266 292 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 RBFOX2O43251 390 aaKnown RBP eCLIP11.09□□□□□ -0.631e-8■■■■■ 42.3
SREBF1-207ENST00000447641 SLC25A17O43808 307 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 FCGR3BO75015 233 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 CDS2O95674 445 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 CRYZL1O95825 349 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 RLN2P04090 185 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 VDAC1P21796 283 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 UBE2KP61086 200 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 SSBP2P81877 361 aaPredicted RBP11.09□□□□□ -0.63
SREBF1-207ENST00000447641 SMCO1Q147U7 214 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 NOXA1Q86UR1 476 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 PPP1R27Q86WC6 154 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 FAM219AQ8IW50 185 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 TEX45Q8NA69 505 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 TCTEX1D2Q8WW35 142 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 RRNAD1Q96FB5 475 aaKnown RBP11.09□□□□□ -0.63
SREBF1-207ENST00000447641 C2orf50Q96LR7 162 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 HARBI1Q96MB7 349 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
SREBF1-207ENST00000447641 TPSG1Q9NRR2 321 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 LINC00527Q9UJ94 153 aa11.09□□□□□ -0.63
SREBF1-207ENST00000447641 C13orf42A0A1B0GVH6 325 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 TNFSF12O43508 249 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 SLC25A6P12236 298 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 CXCL3P19876 107 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 PPIFP30405 207 aaKnown RBP11.08□□□□□ -0.64
SREBF1-207ENST00000447641 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-207ENST00000447641 NDPQ00604 133 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 PJVKQ0ZLH3 352 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 ANKRD55Q3KP44 614 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 TMEM268Q5VZI3 342 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 ZNF329Q86UD4 541 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 NDUFA11Q86Y39 141 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 RNF152Q8N8N0 203 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 OR4S2Q8NH73 311 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 GLYATL2Q8WU03 294 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 GON7Q9BXV9 100 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 FBXO7Q9Y3I1 522 aa11.08□□□□□ -0.64
SREBF1-207ENST00000447641 M0QZ24 198 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 ATP6V0E1O15342 81 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 RAMP3O60896 148 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 IGHG4P01861 327 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 ERVK-16P61578 105 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 PLGLAQ15195 96 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 IAH1Q2TAA2 248 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-207ENST00000447641 COMMD1Q8N668 190 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 THAP6Q8TBB0 222 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 LSM10Q969L4 123 aaKnown RBP11.07□□□□□ -0.64
SREBF1-207ENST00000447641 FYTTD1Q96QD9 318 aaKnown RBP11.07□□□□□ -0.64
SREBF1-207ENST00000447641 TP53RKQ96S44 253 aa11.07□□□□□ -0.64
SREBF1-207ENST00000447641 CA2P00918 260 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 IL6RP08887 468 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-207ENST00000447641 HOXB5P09067 269 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 AKR1C2P52895 323 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 SLC35B1P78383 322 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 FOXE3Q13461 319 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 POU2AF1Q16633 256 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 PRSS8Q16651 343 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 SP6Q3SY56 376 aa11.06□□□□□ -0.64
SREBF1-207ENST00000447641 VMA21Q3ZAQ7 101 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms