RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 LGALS7P47929 136 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 REG1BP48304 166 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 RPS16P62249 146 aaKnown RBP12.74□□□□□ -0.37
SNX13-204ENST00000444712 VMA21Q3ZAQ7 101 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 ZNF787Q6DD87 383 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 ATRAIDQ6UW56 229 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 TMEM167AQ8TBQ9 72 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 RCC1LQ96I51 464 aaKnown RBP12.74□□□□□ -0.37
SNX13-204ENST00000444712 COMMD5Q9GZQ3 224 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 UBTD1Q9HAC8 227 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 PRSS46E5RG02 174 aa12.73□□□□□ -0.37
SNX13-204ENST00000444712 RRHO14718 337 aa12.73□□□□□ -0.37
SNX13-204ENST00000444712 IFNA1P01562 189 aa12.73□□□□□ -0.37
SNX13-204ENST00000444712 IGFBP2P18065 325 aa12.73□□□□□ -0.37
SNX13-204ENST00000444712 ELLP55199 621 aaPredicted RBP12.73□□□□□ -0.37
SNX13-204ENST00000444712 RPL8P62917 257 aaKnown RBP12.73□□□□□ -0.37
SNX13-204ENST00000444712 KHDC3LQ587J8 217 aa12.73□□□□□ -0.37
SNX13-204ENST00000444712 ZNF506Q5JVG8 444 aa12.73□□□□□ -0.37
SNX13-204ENST00000444712 SSBP3Q9BWW4 388 aaPredicted RBP12.73□□□□□ -0.37
SNX13-204ENST00000444712 HIVEP3Q5T1R4 2406 aa12.73□□□□□ -0.37
SNX13-204ENST00000444712 A0A1W2PN81 502 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 A6NNC1 897 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 C9JQL5 133 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 INS-IGF2F8WCM5 200 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 M0R1W7 72 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 HSPB1P04792 205 aaKnown RBP12.72□□□□□ -0.37
SNX13-204ENST00000444712 CHRNA7P36544 502 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 GPR6P46095 362 aaPredicted RBP12.72□□□□□ -0.37
SNX13-204ENST00000444712 ACOT6Q3I5F7 207 aaPredicted RBP12.72□□□□□ -0.37
SNX13-204ENST00000444712 FFAR4Q5NUL3 377 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.72□□□□□ -0.37
SNX13-204ENST00000444712 OR1L8Q8NGR8 309 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 HINT2Q9BX68 163 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 NPVFQ9HCQ7 196 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 TMA7Q9Y2S6 64 aaKnown RBP12.72□□□□□ -0.37
SNX13-204ENST00000444712 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 TEX50A0A1B0GTY4 177 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 F12P00748 615 aaPredicted RBP12.72□□□□□ -0.37
SNX13-204ENST00000444712 PMS2P11Q13670 270 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 CLDND2Q8NHS1 167 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 ACTR3CQ9C0K3 210 aaPredicted RBP12.72□□□□□ -0.37
SNX13-204ENST00000444712 VSIRQ9H7M9 311 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 SLC39A9Q9NUM3 307 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 ONECUT1Q9UBC0 465 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 CHD8Q9HCK8 2581 aa12.72□□□□□ -0.37
SNX13-204ENST00000444712 SMCO3A2RU48 225 aa12.71□□□□□ -0.37
SNX13-204ENST00000444712 MAP1LC3B2A6NCE7 125 aa12.71□□□□□ -0.37
SNX13-204ENST00000444712 BUB1B-PAK6H3BSN5 160 aa12.71□□□□□ -0.37
SNX13-204ENST00000444712 LY6HO94772 140 aa12.71□□□□□ -0.37
SNX13-204ENST00000444712 TAGLN2P37802 199 aaKnown RBP12.71□□□□□ -0.37
SNX13-204ENST00000444712 CCL20P78556 96 aa12.71□□□□□ -0.37
SNX13-204ENST00000444712 MRPL41Q8IXM3 137 aaKnown RBP12.71□□□□□ -0.37
SNX13-204ENST00000444712 MAP1LC3BQ9GZQ8 125 aa12.71□□□□□ -0.37
SNX13-204ENST00000444712 CYB5BO43169 146 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 CA2P00918 260 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 OPRK1P41145 380 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 EFNA4P52798 201 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 ERHP84090 104 aaKnown RBP12.71□□□□□ -0.38
SNX13-204ENST00000444712 RAB31Q13636 194 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 C2orf83Q53S99 150 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 ACSM6Q6P461 480 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 INSIG2Q9Y5U4 225 aa12.71□□□□□ -0.38
SNX13-204ENST00000444712 LOC105371242A0A075B767 164 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 A0A1W2PPR1 153 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 DIAPH2-AS1Q14236 149 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 ZNF726P1Q15940 193 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 HAGHQ16775 308 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 LCN15Q6UWW0 184 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 TREML4Q6UXN2 200 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 CLRN3Q8NCR9 226 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 RPEQ96AT9 228 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 NDUFA4L2Q9NRX3 87 aa12.7□□□□□ -0.38
SNX13-204ENST00000444712 LOC102723971A0A1B0GUV8 181 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 C22orf46C9J442 243 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 DNASE2O00115 360 aaPredicted RBP12.69□□□□□ -0.38
SNX13-204ENST00000444712 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 RBMS3Q6XE24 437 aaKnown RBP12.69□□□□□ -0.38
SNX13-204ENST00000444712 RPP25LQ8N5L8 163 aaKnown RBP12.69□□□□□ -0.38
SNX13-204ENST00000444712 KIR3DL3Q8N743 410 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 TEX45Q8NA69 505 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 TMEM170AQ8WVE7 144 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 RARRES2Q99969 163 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 IGHV1-3A0A0C4DH29 117 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 C19orf84I3L1E1 186 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 IGLV2-23P01705 113 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 BCL2P10415 239 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 CDKN1AP38936 164 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 ICAM4Q14773 271 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 BSXQ3C1V8 233 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 TEPPQ6URK8 271 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 P2RX4Q99571 388 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 RNF5Q99942 180 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 GNG13Q9P2W3 67 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 ABCA4P78363 2273 aa12.69□□□□□ -0.38
SNX13-204ENST00000444712 ENSAO43768 121 aaKnown RBP12.68□□□□□ -0.38
SNX13-204ENST00000444712 NDUFS6O75380 124 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms