RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SP6Q3SY56 376 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 THOC7Q6I9Y2 204 aaKnown RBP11.07□□□□□ -0.64
SSBP3-208ENST00000444533 WIPF2Q8TF74 440 aaPredicted RBP11.07□□□□□ -0.64
SSBP3-208ENST00000444533 PDCD10Q9BUL8 212 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 TMEM222Q9H0R3 208 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 SLA2Q9H6Q3 261 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 H3BUA1 57 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 NDUFB6O95139 128 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 VAMP1P23763 118 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 UCP1P25874 307 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 CCR6P51684 374 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 DEFA1P59665 94 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 DEFA3P59666 94 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 UBE2MP61081 183 aaKnown RBP11.06□□□□□ -0.64
SSBP3-208ENST00000444533 HSD17B13Q7Z5P4 300 aaPredicted RBP11.06□□□□□ -0.64
SSBP3-208ENST00000444533 FAM219AQ8IW50 185 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 MINDY2Q8NBR6 621 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 OR1L8Q8NGR8 309 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 RBPMSQ93062 196 aaKnown RBP11.06□□□□□ -0.64
SSBP3-208ENST00000444533 GALNT14Q96FL9 552 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 COA4Q9NYJ1 87 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 FBXO7Q9Y3I1 522 aa11.06□□□□□ -0.64
SSBP3-208ENST00000444533 TET2Q6N021 2002 aaPredicted RBP11.06□□□□□ -0.64
SSBP3-208ENST00000444533 UPK1BO75841 260 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 PF4P02776 101 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 OR9G9P0C7N8 305 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 EGR2P11161 476 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-208ENST00000444533 DEFA4P12838 97 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 PSMB8P28062 276 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 PPIFP30405 207 aaKnown RBP11.05□□□□□ -0.64
SSBP3-208ENST00000444533 MECP2P51608 486 aaKnown RBP11.05□□□□□ -0.64
SSBP3-208ENST00000444533 RPL23AP62750 156 aaKnown RBP11.05□□□□□ -0.64
SSBP3-208ENST00000444533 CFHR3Q02985 330 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 TMEM268Q5VZI3 342 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 C10orf99Q6UWK7 81 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 LGI3Q8N145 548 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 ADAD2Q8NCV1 583 aaKnown RBP11.05□□□□□ -0.64
SSBP3-208ENST00000444533 OR5T1Q8NG75 326 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 OR5B3Q8NH48 314 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 IL22RA2Q969J5 263 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 SEC22AQ96IW7 307 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 TMEM56Q96MV1 263 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 SRSF8Q9BRL6 282 aaKnown RBP11.05□□□□□ -0.64
SSBP3-208ENST00000444533 HINT2Q9BX68 163 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
SSBP3-208ENST00000444533 CACFD1Q9UGQ2 172 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 OR51B2Q9Y5P1 312 aa11.05□□□□□ -0.64
SSBP3-208ENST00000444533 A0A0G2JLM5 398 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 FAM240BA0A1B0GVZ2 78 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 CDS2O95674 445 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 IGLV1-40P01703 118 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 TRGV3P03979 118 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 RPLP1P05386 114 aaKnown RBP11.04□□□□□ -0.64
SSBP3-208ENST00000444533 TRAPPC2P0DI81 140 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 TRAPPC2BP0DI82 140 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 APELAP0DMC3 54 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 RAB9AP51151 201 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 TPPP2P59282 170 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 RNF152Q8N8N0 203 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 KLHL30-AS1Q8NEE0 82 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-208ENST00000444533 GLYATL2Q8WU03 294 aa11.04□□□□□ -0.64
SSBP3-208ENST00000444533 C13orf42A0A1B0GVH6 325 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 C15orf61A6NNL5 157 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 IFNA17P01571 189 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 CDX1P47902 265 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-208ENST00000444533 OR2B8PP59922 312 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 C4orf46Q504U0 113 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 TCTEX1D4Q5JR98 221 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 C10orf55Q5SWW7 151 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 UBE2E2Q96LR5 201 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 MS4A10Q96PG2 267 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 ENY2Q9NPA8 101 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 ZNF257Q9Y2Q1 563 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 NSG2Q9Y328 171 aa11.03□□□□□ -0.64
SSBP3-208ENST00000444533 TRAV3A0A0B4J244 114 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 PLA2G10O15496 165 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 IGKV1-39P01597 117 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 IGKV1D-39P04432 117 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 IL6RP08887 468 aaPredicted RBP11.02□□□□□ -0.65
SSBP3-208ENST00000444533 SSBP2P81877 361 aaPredicted RBP11.02□□□□□ -0.65
SSBP3-208ENST00000444533 ASAH1Q13510 395 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 TMEM187Q14656 261 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 MRGPRG-AS1Q2M3A8 158 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 C19orf54Q5BKX5 351 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
SSBP3-208ENST00000444533 TTC9CQ8N5M4 171 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 COQ8AQ8NI60 647 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 CASTOR1Q8WTX7 329 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 C4orf3Q8WVX3 66 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 LSM10Q969L4 123 aaKnown RBP11.02□□□□□ -0.65
SSBP3-208ENST00000444533 TMEM230Q96A57 120 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 TMEM14BQ9NUH8 114 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 THYN1Q9P016 225 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 TMEM56-RWDD3S4R434 201 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 TENM1Q9UKZ4 2725 aa11.02□□□□□ -0.65
SSBP3-208ENST00000444533 A0A0B4J2A0 478 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 TEX50A0A1B0GTY4 177 aa11.01□□□□□ -0.65
SSBP3-208ENST00000444533 DUXBA0A1W2PPF3 345 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms