RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 C15orf32Q32M92 178 aa14.4□□□□□ -0.1
ATPAF2-201ENST00000444058 THOC7Q6I9Y2 204 aaKnown RBP14.4□□□□□ -0.1
ATPAF2-201ENST00000444058 DGCR14Q96DF8 476 aaKnown RBP14.4□□□□□ -0.1
ATPAF2-201ENST00000444058 COMMD5Q9GZQ3 224 aa14.4□□□□□ -0.1
ATPAF2-201ENST00000444058 FXYD6Q9H0Q3 95 aa14.4□□□□□ -0.1
ATPAF2-201ENST00000444058 FAM212BQ9NTI7 297 aaPredicted RBP14.4□□□□□ -0.1
ATPAF2-201ENST00000444058 TMEM140Q9NV12 185 aa14.4□□□□□ -0.1
ATPAF2-201ENST00000444058 FAM25AB3EWG3 89 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 FAM25CB3EWG5 89 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 FAM25GB3EWG6 89 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 OR2J3O76001 311 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 S1PR2O95136 353 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 GP9P14770 177 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 HIST1H1BP16401 226 aaKnown RBP14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 CTRB1P17538 263 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 S100GP29377 79 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 UCP3P55916 312 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 SYNJ2BPP57105 145 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 OR2B8PP59922 312 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 CTRB2Q6GPI1 263 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 IL34Q6ZMJ4 242 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 DMBX1Q8NFW5 382 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 FANCD2OSQ96PS1 177 aa14.39□□□□□ -0.11
ATPAF2-201ENST00000444058 CGB1A6NKQ9 187 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 MARCH11A6NNE9 402 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 AREGP15514 252 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 ERVK-16P61578 105 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 HSD17B13Q7Z5P4 300 aaPredicted RBP14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 BCL7BQ9BQE9 202 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 RSRP1Q9BUV0 290 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 PEMTQ9UBM1 199 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 FBXL7Q9UJT9 491 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 COL7A1Q02388 2944 aa14.38□□□□□ -0.11
ATPAF2-201ENST00000444058 TRAV3A0A0B4J244 114 aa14.37□□□□□ -0.11
ATPAF2-201ENST00000444058 BMPR1BO00238 502 aa14.37□□□□□ -0.11
ATPAF2-201ENST00000444058 TBPP20226 339 aa14.37□□□□□ -0.11
ATPAF2-201ENST00000444058 ZNF585BQ52M93 769 aa14.37□□□□□ -0.11
ATPAF2-201ENST00000444058 SLC38A6Q8IZM9 456 aa14.37□□□□□ -0.11
ATPAF2-201ENST00000444058 FCAMRQ8WWV6 532 aa14.37□□□□□ -0.11
ATPAF2-201ENST00000444058 EXTL2Q9UBQ6 330 aa14.37□□□□□ -0.11
ATPAF2-201ENST00000444058 MTFP1Q9UDX5 166 aa14.37□□□□□ -0.11
ATPAF2-201ENST00000444058 IGLC7A0M8Q6 106 aa14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 H0Y980 276 aa14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 DEFA4P12838 97 aa14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 LPAR6P43657 344 aa14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 C11orf87Q6NUJ2 197 aa14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 RAB2BQ8WUD1 216 aa14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 QTRT1Q9BXR0 403 aaKnown RBP14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 KLK11Q9UBX7 282 aa14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 DMRT1Q9Y5R6 373 aa14.36□□□□□ -0.11
ATPAF2-201ENST00000444058 IGLV11-55A0A075B6I3 123 aa14.35□□□□□ -0.11
ATPAF2-201ENST00000444058 CSN3P07498 182 aa14.35□□□□□ -0.11
ATPAF2-201ENST00000444058 MYOD1P15172 320 aa14.35□□□□□ -0.11
ATPAF2-201ENST00000444058 TMBIM6P55061 237 aa14.35□□□□□ -0.11
ATPAF2-201ENST00000444058 ARRDC1Q8N5I2 433 aa14.35□□□□□ -0.11
ATPAF2-201ENST00000444058 CXorf58Q96LI9 332 aa14.35□□□□□ -0.11
ATPAF2-201ENST00000444058 ABHD1Q96SE0 405 aa14.35□□□□□ -0.11
ATPAF2-201ENST00000444058 THYN1Q9P016 225 aa14.35□□□□□ -0.11
ATPAF2-201ENST00000444058 GGCTO75223 188 aaKnown RBP14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 NDUFB8O95169 186 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 KRASP01116 189 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 IFNA6P05013 189 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 PTBP1P26599 531 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 MRPS10P82664 201 aaKnown RBP14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 SSBP1Q04837 148 aaKnown RBP14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 SPCS2Q15005 226 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 PHLDA2Q53GA4 152 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 RNASE10Q5GAN6 216 aaKnown RBP14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 C19orf35Q6ZS72 473 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 OR1L8Q8NGR8 309 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 OR52I2Q8NH67 350 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 EEF1AKMT3Q96AZ1 226 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 ZNF486Q96H40 463 aaPredicted RBP14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 TSC22D3Q99576 134 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 FKBP11Q9NYL4 201 aa14.34□□□□□ -0.11
ATPAF2-201ENST00000444058 TRBV7-1A0A0A6YYK4 115 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 TEX50A0A1B0GTY4 177 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 LGALS9O00182 355 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 CYB5BO43169 146 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 SNAPC5O75971 98 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 TRAPPC2P0DI81 140 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 TRAPPC2BP0DI82 140 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 MECP2P51608 486 aaKnown RBP14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 TBC1D26Q86UD7 250 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 LHFPL1Q86WI0 220 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 GPHB5Q86YW7 130 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 CLVS1Q8IUQ0 354 aaPredicted RBP14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 OR2K2Q8NGT1 345 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 OR5B3Q8NH48 314 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 CCDC140Q96MF4 163 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 MIXL1Q9H2W2 232 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 NDUFA4L2Q9NRX3 87 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 RABL2AQ9UBK7 228 aaPredicted RBP14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 PRNDQ9UKY0 176 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 RABL2BQ9UNT1 228 aa14.33□□□□□ -0.12
ATPAF2-201ENST00000444058 GABARAPH6UMI1 98 aa14.32□□□□□ -0.12
ATPAF2-201ENST00000444058 M0QYG6 137 aa14.32□□□□□ -0.12
ATPAF2-201ENST00000444058 CD74P04233 296 aa14.32□□□□□ -0.12
ATPAF2-201ENST00000444058 RPA2P15927 270 aa14.32□□□□□ -0.12
ATPAF2-201ENST00000444058 G6PCP35575 357 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms