RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 CGAP01215 116 aa8.77□□□□□ -1
CALD1-210ENST00000443197 MDKP21741 143 aaPredicted RBP8.77□□□□□ -1
CALD1-210ENST00000443197 GATA2P23769 480 aaPredicted RBP8.77□□□□□ -1
CALD1-210ENST00000443197 LCN2P80188 198 aa8.77□□□□□ -1
CALD1-210ENST00000443197 Q56UQ5 140 aa8.77□□□□□ -1
CALD1-210ENST00000443197 CRIP3Q6Q6R5 217 aa8.77□□□□□ -1
CALD1-210ENST00000443197 RCC1LQ96I51 464 aaKnown RBP8.77□□□□□ -1
CALD1-210ENST00000443197 SEBOXQ9HB31 216 aaPredicted RBP8.77□□□□□ -1
CALD1-210ENST00000443197 MBNL3Q9NUK0 354 aaKnown RBP8.77□□□□□ -1
CALD1-210ENST00000443197 BCL2P10415 239 aa8.77□□□□□ -1.01
CALD1-210ENST00000443197 RPL27AP46776 148 aaKnown RBP8.77□□□□□ -1.01
CALD1-210ENST00000443197 ZNF585BQ52M93 769 aa8.77□□□□□ -1.01
CALD1-210ENST00000443197 OR4X1Q8NH49 305 aa8.77□□□□□ -1.01
CALD1-210ENST00000443197 DMRTA2Q96SC8 542 aa8.77□□□□□ -1.01
CALD1-210ENST00000443197 UBE2L3P68036 154 aaKnown RBP8.77□□□□□ -1.01
CALD1-210ENST00000443197 FLI1Q01543 452 aaPredicted RBP8.77□□□□□ -1.01
CALD1-210ENST00000443197 ZNF90Q03938 601 aa8.77□□□□□ -1.01
CALD1-210ENST00000443197 SRSF7Q16629 238 aaKnown RBP eCLIP8.77□□□□□ -1.01
CALD1-210ENST00000443197 ZNF525Q8N782 197 aa8.77□□□□□ -1.01
CALD1-210ENST00000443197 C15orf54Q8N8G6 183 aa8.77□□□□□ -1.01
CALD1-210ENST00000443197 FAM122AQ96E09 287 aa8.77□□□□□ -1.01
CALD1-210ENST00000443197 DOPEY2Q9Y3R5 2298 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 LOC105371242A0A075B767 164 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 TMEM178BH3BS89 294 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 LY86O95711 162 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 HTR1DP28221 377 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 C11orf53Q8IXP5 236 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 CLEC7AQ9BXN2 247 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 VSIRQ9H7M9 311 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 TMEM50AO95807 157 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 GNLYP22749 145 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 ERVFC1-1P60608 527 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 ZNF672Q499Z4 452 aaPredicted RBP8.76□□□□□ -1.01
CALD1-210ENST00000443197 S4R3C0 116 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 TRBV6-6A0A0A6YYG2 114 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 ZNF320A2RRD8 509 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 CRYBA1P05813 215 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 LIPFP07098 398 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 COL8A2P25067 703 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 MC5RP33032 325 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 SNRPEP62304 92 aaKnown RBP8.76□□□□□ -1.01
CALD1-210ENST00000443197 BSXQ3C1V8 233 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 TMEM200BQ69YZ2 307 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 SPNS3Q6ZMD2 512 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 TMEM186Q96B77 213 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 GAFA1Q96PS6 74 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 FBXL15Q9H469 300 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 MYO18BQ8IUG5 2567 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 CCDC168Q8NDH2 2452 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 CLDN34H7C241 214 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 PAX6P26367 422 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 CA7P43166 264 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 RND2P52198 227 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 SRSF4Q08170 494 aaKnown RBP8.76□□□□□ -1.01
CALD1-210ENST00000443197 MSMPQ1L6U9 139 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 C10orf55Q5SWW7 151 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 Q6ZS49 121 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 Q6ZSR3 168 aa8.76□□□□□ -1.01
CALD1-210ENST00000443197 MGAQ8IWI9 3026 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 IGHV3-35A0A0C4DH35 117 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 KHDC3LQ587J8 217 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 C22orf34Q6ZV56 151 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 MIOXQ9UGB7 285 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 RPUSD1Q9UJJ7 312 aaKnown RBP8.75□□□□□ -1.01
CALD1-210ENST00000443197 SLC45A2Q9UMX9 530 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 RRHO14718 337 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 SAA1P0DJI8 122 aaPredicted RBP8.75□□□□□ -1.01
CALD1-210ENST00000443197 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
CALD1-210ENST00000443197 LRRC75BQ2VPJ9 315 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 TMEM37Q8WXS4 190 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 NPIPB3Q92617 1050 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 NPCDR1Q9BY65 106 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 H3BTX0 84 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 NDUFB4O95168 129 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 FAM157CP0CG43 387 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 MEF2BQ02080 365 aaPredicted RBP8.75□□□□□ -1.01
CALD1-210ENST00000443197 ECSCRQ19T08 205 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 GCSAMLQ5JQS6 135 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 IGF2-ASQ6U949 168 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 OR10W1Q8NGF6 305 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 COA4Q9NYJ1 87 aa8.75□□□□□ -1.01
CALD1-210ENST00000443197 ZNF705GA8MUZ8 300 aaPredicted RBP8.74□□□□□ -1.01
CALD1-210ENST00000443197 MMP23AO75900 390 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 LINC00869P0C866 280 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 LMO1P25800 156 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 ZNF788Q6ZQV5 615 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 FAM169BQ8N8A8 192 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 PPP1R2P9O14990 202 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 FGF16O43320 207 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 IGKV1-39P01597 117 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 IGKV1D-39P04432 117 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 MEF2CQ06413 473 aaPredicted RBP8.74□□□□□ -1.01
CALD1-210ENST00000443197 PFDN5Q99471 154 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 TNCP24821 2201 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 F2RL2O00254 374 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 USF1P22415 310 aaPredicted RBP8.74□□□□□ -1.01
CALD1-210ENST00000443197 ATP5J2P56134 94 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 RANP62826 216 aaKnown RBP8.74□□□□□ -1.01
CALD1-210ENST00000443197 Q8NFD4 153 aa8.74□□□□□ -1.01
CALD1-210ENST00000443197 NUP37Q8NFH4 326 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms