RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FLVCR2Q9UPI3 526 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
USP39-205ENST00000442708 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
USP39-205ENST00000442708 HMX3A6NHT5 357 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 DBX1A6NMT0 343 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 NDUFB6O95139 128 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 HLA-GP17693 338 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 MAS1LP35410 378 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 TMED4Q7Z7H5 227 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 CADM3Q8N126 398 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 COMMD1Q8N668 190 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 OR5T1Q8NG75 326 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 MYOZ3Q8TDC0 251 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 SCGB3A2Q96PL1 93 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 C7orf50Q9BRJ6 194 aaKnown RBP12.5□□□□□ -0.41
USP39-205ENST00000442708 TSSC4Q9Y5U2 329 aaPredicted RBP12.5□□□□□ -0.41
USP39-205ENST00000442708 TRRAPQ9Y4A5 3859 aa12.5□□□□□ -0.41
USP39-205ENST00000442708 A0A0G2JRQ6 117 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 LYRM1O43325 122 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 CREBL2O60519 120 aaPredicted RBP12.49□□□□□ -0.41
USP39-205ENST00000442708 ACTL6BO94805 426 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 CDS2O95674 445 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 ELANEP08246 267 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 RPL27AP46776 148 aaKnown RBP12.49□□□□□ -0.41
USP39-205ENST00000442708 OR2B8PP59922 312 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 RPL23AP62750 156 aaKnown RBP12.49□□□□□ -0.41
USP39-205ENST00000442708 TMEM267Q0VDI3 215 aaPredicted RBP12.49□□□□□ -0.41
USP39-205ENST00000442708 TMEM187Q14656 261 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 RBMS2Q15434 407 aaKnown RBP12.49□□□□□ -0.41
USP39-205ENST00000442708 TRIM16LQ309B1 348 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 KHDC1LQ5JSQ8 128 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 C19orf35Q6ZS72 473 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 SGPP2Q8IWX5 399 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 GALNT14Q96FL9 552 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 PHB2Q99623 299 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 WNK1Q9H4A3 2382 aa12.49□□□□□ -0.41
USP39-205ENST00000442708 TEX50A0A1B0GTY4 177 aa12.48□□□□□ -0.41
USP39-205ENST00000442708 CENPXA8MT69 81 aa12.48□□□□□ -0.41
USP39-205ENST00000442708 B3GALNT1O75752 331 aa12.48□□□□□ -0.41
USP39-205ENST00000442708 UPK1BO75841 260 aa12.48□□□□□ -0.41
USP39-205ENST00000442708 PF4V1P10720 104 aa12.48□□□□□ -0.41
USP39-205ENST00000442708 AREGP15514 252 aa12.48□□□□□ -0.41
USP39-205ENST00000442708 DHODHQ02127 395 aa12.48□□□□□ -0.41
USP39-205ENST00000442708 CXorf66Q5JRM2 361 aaPredicted RBP12.48□□□□□ -0.41
USP39-205ENST00000442708 SELENOHQ8IZQ5 122 aaKnown RBP12.48□□□□□ -0.41
USP39-205ENST00000442708 MS4A10Q96PG2 267 aa12.48□□□□□ -0.41
USP39-205ENST00000442708 FYTTD1Q96QD9 318 aaKnown RBP12.48□□□□□ -0.41
USP39-205ENST00000442708 M0QZ24 198 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 RBMXL2O75526 392 aaKnown RBP12.47□□□□□ -0.41
USP39-205ENST00000442708 FGF2P09038 288 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 RAB9AP51151 201 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 DEFA5Q01523 94 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 C2orf68Q2NKX9 166 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 PRR31Q5SQ13 230 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 H2BFWTQ7Z2G1 175 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 SLC25A42Q86VD7 318 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 CENPSQ8N2Z9 138 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 OR5M8Q8NGP6 311 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 SPIN2AQ99865 258 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 SPIN2BQ9BPZ2 258 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 TMEM14BQ9NUH8 114 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 TMEM56-RWDD3S4R434 201 aa12.47□□□□□ -0.41
USP39-205ENST00000442708 A0A0B4J293 547 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 PRH1P02810 166 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 SLC6A1P30531 599 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 ASAH1Q13510 395 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 PPP1R1AQ13522 171 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 ANKRD55Q3KP44 614 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 TMEM128Q5BJH2 165 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 TMEM268Q5VZI3 342 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 TMEM65Q6PI78 240 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 Q6ZRM9 215 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 TTC9CQ8N5M4 171 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 ZNF491Q8N8L2 437 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 OR10W1Q8NGF6 305 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 FAM110DQ8TAY7 271 aaPredicted RBP12.46□□□□□ -0.41
USP39-205ENST00000442708 RBPMSQ93062 196 aaKnown RBP12.46□□□□□ -0.41
USP39-205ENST00000442708 TMEM68Q96MH6 324 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 GNB4Q9HAV0 340 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 ZFP57Q9NU63 452 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 KCNIP3Q9Y2W7 256 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 OR51B2Q9Y5P1 312 aa12.46□□□□□ -0.41
USP39-205ENST00000442708 IGLC7A0M8Q6 106 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 C15orf61A6NNL5 157 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 SNAPC5O75971 98 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 REG1AP05451 166 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
USP39-205ENST00000442708 AKR1C2P52895 323 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 ETV3LQ6ZN32 361 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 KLHL30-AS1Q8NEE0 82 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 QTRT1Q9BXR0 403 aaKnown RBP12.45□□□□□ -0.42
USP39-205ENST00000442708 COMMD5Q9GZQ3 224 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 NDUFA4L2Q9NRX3 87 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 ZNF355PQ9NSJ1 428 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 COA4Q9NYJ1 87 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 PRNDQ9UKY0 176 aa12.45□□□□□ -0.42
USP39-205ENST00000442708 SFT2D2O95562 160 aa12.44□□□□□ -0.42
USP39-205ENST00000442708 TRGV3P03979 118 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms