RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 SLC35B1P78383 322 aa11.75□□□□□ -0.53
MCF2L-218ENST00000442625 OR5I1Q13606 314 aa11.75□□□□□ -0.53
MCF2L-218ENST00000442625 MIC13Q5XKP0 118 aa11.75□□□□□ -0.53
MCF2L-218ENST00000442625 MRPL52Q86TS9 123 aaKnown RBP11.75□□□□□ -0.53
MCF2L-218ENST00000442625 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
MCF2L-218ENST00000442625 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
MCF2L-218ENST00000442625 MBNL3Q9NUK0 354 aaKnown RBP11.75□□□□□ -0.53
MCF2L-218ENST00000442625 TMEM106BQ9NUM4 274 aa11.75□□□□□ -0.53
MCF2L-218ENST00000442625 A0A1B0GV72 72 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 C9orf172C9J069 976 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 SH2D1BO14796 132 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 KITLGP21583 273 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 LCN2P80188 198 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 MSMO1Q15800 293 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 BCL2L2Q92843 193 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-218ENST00000442625 CITED1Q99966 193 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 GP6Q9HCN6 339 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 KNTC1P50748 2209 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 HCFC1P51610 2035 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 MDFIC2A0A1B0GVS7 189 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 HAND1O96004 215 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 HBZP02008 142 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 OR9G9P0C7N8 305 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 PSG7Q13046 419 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 SPATA31B1PQ5VZV4 182 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 OR1L6Q8NGR2 347 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
MCF2L-218ENST00000442625 K7EN84 100 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 MEOX1P50221 254 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 TNFSF10P50591 281 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 ZNF90Q03938 601 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 KIAA1644Q3SXP7 199 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 TPTE2P1Q5T6R2 138 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 GALMQ96C23 342 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 HINT2Q9BX68 163 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 PSG11Q9UQ72 335 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 YTHDF2Q9Y5A9 579 aaKnown RBP11.73□□□□□ -0.53
MCF2L-218ENST00000442625 YPEL1O60688 119 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 FOXH1O75593 365 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 CLDN14O95500 239 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 IER3P46695 156 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 GABRA2P47869 451 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 TBC1D28Q2M2D7 210 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 SLC25A40Q8TBP6 338 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 YPEL2Q96QA6 119 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 WIPI2Q9Y4P8 454 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 RNF212BA8MTL3 300 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 C11orf42Q8N5U0 333 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 FAM222BQ8WU58 562 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 MRPL18Q9H0U6 180 aaKnown RBP11.73□□□□□ -0.53
MCF2L-218ENST00000442625 FZR1Q9UM11 496 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 GPR179Q6PRD1 2367 aa11.73□□□□□ -0.53
MCF2L-218ENST00000442625 A0A1W2PNU3 283 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-218ENST00000442625 LYZL6O75951 148 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 ZNF146Q15072 292 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 OBP2BQ9NPH6 170 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 TET2Q6N021 2002 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-218ENST00000442625 TRAV3A0A0B4J244 114 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 PDE6DO43924 150 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 TDGF1P13385 188 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 CRISP2P16562 243 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 TIMP3P35625 211 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 MPV17P39210 176 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 FOXL1Q12952 345 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 BAGE2Q86Y30 109 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 OR10G8Q8NGN5 311 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 SMPXQ9UHP9 88 aa11.72□□□□□ -0.53
MCF2L-218ENST00000442625 C17orf112F2Z3M2 114 aa11.71□□□□□ -0.53
MCF2L-218ENST00000442625 CCL25O15444 150 aa11.71□□□□□ -0.53
MCF2L-218ENST00000442625 KRTDAPP60985 99 aa11.71□□□□□ -0.53
MCF2L-218ENST00000442625 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-218ENST00000442625 C5orf64Q2M2E5 130 aa11.71□□□□□ -0.53
MCF2L-218ENST00000442625 Q8IYB0 196 aa11.71□□□□□ -0.53
MCF2L-218ENST00000442625 LYG1Q8N1E2 194 aa11.71□□□□□ -0.53
MCF2L-218ENST00000442625 MS4A5Q9H3V2 200 aa11.71□□□□□ -0.53
MCF2L-218ENST00000442625 TMEM30CPA0ZSE6 113 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 TMPRSS2O15393 492 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 BRS3P32247 399 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 SMIM21Q3B7S5 101 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 ATP1A1-AS1Q5TC04 95 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 NANOS1Q8WY41 292 aaKnown RBP11.71□□□□□ -0.54
MCF2L-218ENST00000442625 NINJ1Q92982 152 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 COQ2Q96H96 371 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 MGST2Q99735 147 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 SAMD10Q9BYL1 202 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 KCNIP2Q9NS61 270 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 TBL2Q9Y4P3 447 aaKnown RBP11.71□□□□□ -0.54
MCF2L-218ENST00000442625 SVILO95425 2214 aa11.71□□□□□ -0.54
MCF2L-218ENST00000442625 KMT2EQ8IZD2 1858 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 FCN1O00602 326 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 FCGR3BO75015 233 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 RNFT1Q5M7Z0 435 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms