RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 OR2T6Q8NHC8 308 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 KCNG3Q8TAE7 436 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 NEIL1Q96FI4 390 aaPredicted RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 NECAP2Q9NVZ3 263 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TAAR2Q9P1P5 351 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 INSIG2Q9Y5U4 225 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PLXND1Q9Y4D7 1925 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 STAB2Q8WWQ8 2551 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 FNDC1Q4ZHG4 1894 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 ETV2O00321 342 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 HMGN4O00479 90 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 SCRG1O75711 98 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 APOMO95445 188 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ETHE1O95571 254 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 HBZP02008 142 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 TYMSP04818 313 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 CD22P20273 847 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 DYNLT3P51808 116 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 NANOS3P60323 173 aaKnown RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 B4GALNT1Q00973 533 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 EGR4Q05215 589 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 FOXL1Q12952 345 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 KIR3DS1Q14943 382 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 CEACAM16Q2WEN9 425 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF585BQ52M93 769 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 PHLDA2Q53GA4 152 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 GLIPR1L1Q6UWM5 242 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 PRR22Q8IZ63 422 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZADH2Q8N4Q0 377 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR10G8Q8NGN5 311 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 PFN4Q8NHR9 129 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 GRAMD2BQ96HH9 432 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 UHRF2Q96PU4 802 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 NMNAT3Q96T66 252 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 CLEC7AQ9BXN2 247 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 CALHM2Q9HA72 323 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF331Q9NQX6 463 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 TAS2R4Q9NYW5 299 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 B4GALT6Q9UBX8 382 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ATP23Q9Y6H3 246 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 COL4A4P53420 1690 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 TRBV20-1A0A075B6N2 111 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 TRGV10A0A0A0MS01 117 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 PHF1O43189 567 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 SYNGR1O43759 233 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 NDUFB2O95178 105 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 IL11P20809 199 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 GATA2P23769 480 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR3A4PP47883 348 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 SNU13P55769 128 aaKnown RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 YPEL5P62699 121 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 KLRB1Q12918 225 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 FOXF1Q12946 379 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 GAGE2BQ13066 116 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 PDE7AQ13946 482 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 IHHQ14623 411 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 GAGE2EQ4V326 116 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 AGTRAPQ6RW13 159 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 NEGR1Q7Z3B1 354 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF695Q8IW36 515 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF595Q8IYB9 648 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 CA13Q8N1Q1 262 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF808Q8N4W9 903 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 FDCSPQ8NFU4 85 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 PLPPR1Q8TBJ4 325 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 SLC37A2Q8TED4 501 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 CT55Q8WUE5 264 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 UBE2E3Q969T4 207 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 SGK494Q96LW2 274 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR8B2Q96RD0 313 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 TNFRSF13CQ96RJ3 184 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 TMEM70Q9BUB7 260 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 PPDPFQ9H3Y8 114 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 GNB4Q9HAV0 340 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 CRIM1Q9NZV1 1036 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 GAGE2DQ9UEU5 116 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 VPREB3Q9UKI3 123 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 TMEM14AQ9Y6G1 99 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 DCHS2Q6V1P9 2916 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 A0A0G2JMZ2 1700 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 hDV102S1A0JD36 115 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 F2Z2F3 143 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 H3BRM9 83 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 YPEL1O60688 119 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 PITX3O75364 302 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 SNCGO76070 127 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 HMGN2P05204 90 aaKnown RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 LINC00869P0C866 280 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 RPS27P42677 84 aaKnown RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 FBXW4P57775 412 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR1Q1Q15612 314 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 MRPL23Q16540 153 aaKnown RBP2.36□□□□□ -2.03
LIG4-203ENST00000442234 OR4C11Q6IEV9 310 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 ASCL4Q6XD76 172 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 TMEM136Q6ZRR5 245 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 SSX8Q7RTT4 187 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 LINC00346Q8IVM7 164 aa2.36□□□□□ -2.03
LIG4-203ENST00000442234 FBXL14Q8N1E6 418 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms