RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM204Q9BSN7 226 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 TTTY12Q9BZ98 90 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 TUBG2Q9NRH3 451 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 SLC35D1Q9NTN3 355 aa9.91□□□□□ -0.82
LTBR-203ENST00000441074 ZNF407Q9C0G0 2248 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 IGHV2OR16-5A0A0B4J2B6 119 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 C9JCJ5 164 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 RAMP3O60896 148 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 CXorf1O96002 111 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 FRMD6-AS1P0C7T7 363 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 STAG3L2P0CL84 134 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 STAG3L3P0CL85 134 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 ARL14EPLP0DKL9 152 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 CD1BP29016 333 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 GFRA1P56159 465 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 EDDM3BP56851 147 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 ARF1P84077 181 aaKnown RBP9.9□□□□□ -0.82
LTBR-203ENST00000441074 HTD2P86397 168 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 TGFBR3Q03167 851 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 COX19Q49B96 90 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 RNFT1Q5M7Z0 435 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 Q6P435 159 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 UNQ5815/PRO19632Q6UWF5 114 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 OR5B3Q8NH48 314 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 CDC42EP3Q9UKI2 254 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 IGHV2-70DA0A0C4DH43 119 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 C5orf49A4QMS7 147 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 RAB29O14966 203 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 ZNF324O75467 553 aaPredicted RBP9.9□□□□□ -0.82
LTBR-203ENST00000441074 C3orf79P0CE67 100 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 HINT1P49773 126 aaPredicted RBP9.9□□□□□ -0.82
LTBR-203ENST00000441074 ZNF83P51522 516 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 ZNF718Q3SXZ3 478 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 ZNF497Q6ZNH5 498 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 C19orf35Q6ZS72 473 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 MCEMP1Q8IX19 187 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 ST6GALNAC3Q8NDV1 305 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 FDCSPQ8NFU4 85 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 MRGPRDQ8TDS7 321 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 PKIBQ9C010 78 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 NAT8BQ9UHF3 227 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 TRAPPC2LQ9UL33 140 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 BOKQ9UMX3 212 aaPredicted RBP9.9□□□□□ -0.82
LTBR-203ENST00000441074 MPC1Q9Y5U8 109 aa9.9□□□□□ -0.82
LTBR-203ENST00000441074 TPRP12270 2363 aaKnown RBP9.89□□□□□ -0.83
LTBR-203ENST00000441074 IGHV2-26A0A0B4J1V2 119 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 ANKRD30BLA7E2S9 258 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 MPDU1O75352 247 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 CCNOP22674 350 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 ARR3P36575 388 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 OPRK1P41145 380 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 ZNF816Q0VGE8 651 aaPredicted RBP9.89□□□□□ -0.83
LTBR-203ENST00000441074 AARDQ4LEZ3 155 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 FBLN7Q53RD9 439 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 ALKBH2Q6NS38 261 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 NIT1Q86X76 327 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 PNKDQ8N490 385 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 ZNF645Q8N7E2 425 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 C11orf52Q96A22 123 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 DEFB127Q9H1M4 99 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 V9GYV3 84 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 SMG1Q96Q15 3661 aaKnown RBP9.89□□□□□ -0.83
LTBR-203ENST00000441074 TRGV10A0A0A0MS01 117 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 C15orf62A8K5M9 175 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 S1PR2O95136 353 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 CLDN14O95500 239 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 PPBPP02775 128 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 PMCHP20382 165 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 RPL31P62899 125 aaKnown RBP9.89□□□□□ -0.83
LTBR-203ENST00000441074 GNG3P63215 75 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 OR8I2Q8N0Y5 310 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 TMEM251Q8N6I4 163 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
LTBR-203ENST00000441074 FER1L6-AS2Q96M78 137 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 FAM173AQ9BQD7 235 aa9.89□□□□□ -0.83
LTBR-203ENST00000441074 YTHDF2Q9Y5A9 579 aaKnown RBP9.89□□□□□ -0.83
LTBR-203ENST00000441074 TRAV34A0A0B4J273 112 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 NXPH2O95156 264 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 RPL30P62888 115 aaKnown RBP9.88□□□□□ -0.83
LTBR-203ENST00000441074 CX3CL1P78423 397 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 ARG2P78540 354 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 PLGLB1Q02325 96 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 EIF4EBP1Q13541 118 aaPredicted RBP9.88□□□□□ -0.83
LTBR-203ENST00000441074 PMCHL1Q16048 86 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 TMEM136Q6ZRR5 245 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 Q6ZVH6 145 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 OR4C5Q8NGB2 326 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 UBALD1Q8TB05 177 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 MBNL3Q9NUK0 354 aaKnown RBP9.88□□□□□ -0.83
LTBR-203ENST00000441074 DNAJC13O75165 2243 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 IGHV1-69-2A0A0G2JMI3 117 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 SIRPB1O00241 398 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 RRHO14718 337 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 SP1P08047 785 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 OR10J4P0C629 311 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 TNFSF4P23510 183 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 MEOX1P50221 254 aa9.88□□□□□ -0.83
LTBR-203ENST00000441074 PLP2Q04941 152 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms