RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HIST2H2BDQ6DRA6 164 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 WDR82Q6UXN9 313 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 BRD3OSQ6XYD6 125 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 SSX9Q7RTT3 188 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 LRRC75A-AS1Q8N1F1 130 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 TCTEX1D2Q8WW35 142 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 NEU4Q8WWR8 484 aaPredicted RBP3.9□□□□□ -1.78
EDEM3-203ENST00000439962 H1FXQ92522 213 aaKnown RBP3.9□□□□□ -1.78
EDEM3-203ENST00000439962 CYYR1Q96J86 154 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 C7orf69Q9H7B7 122 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 IL36RNQ9UBH0 155 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 PPIAL4AQ9Y536 164 aa3.9□□□□□ -1.78
EDEM3-203ENST00000439962 IGLV3-9A0A075B6K5 115 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 TRBV24-1A0A075B6N3 115 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 SEC14L6B5MCN3 397 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 H3BQ15 152 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 M0R036 132 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 AP4M1O00189 453 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 OR2C1O95371 312 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 HPRT1P00492 218 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 OPN1MWP04001 364 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 S100A9P06702 114 aaKnown RBP3.9□□□□□ -1.79
EDEM3-203ENST00000439962 S100A6P06703 90 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 OPN1MW2P0DN77 364 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 OPN1MW3P0DN78 364 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 OR3A1P47881 315 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 PSMB3P49720 205 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 CTAG1AP78358 180 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 SLC38A11Q08AI6 406 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 POU2AF1Q16633 256 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 SLC25A24Q6NUK1 477 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 PRSS57Q6UWY2 283 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 ZNF429Q86V71 674 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 LILRB2Q8N423 598 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 MEGF10Q96KG7 1140 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 CLCC1Q96S66 551 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 CCL13Q99616 98 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 OR6C3Q9NZP0 311 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 OR1A1Q9P1Q5 309 aa3.9□□□□□ -1.79
EDEM3-203ENST00000439962 A0A0G2JRQ6 117 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 PMS2P5A8MQ11 134 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 C12orf77C9JDV5 145 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 C15orf65H3BRN8 121 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 SIRPB1O00241 398 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 IGHV3-7P01780 117 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 ARG1P05089 322 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 SLC25A16P16260 332 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 TNFRSF1AP19438 455 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 THNSL2Q86YJ6 484 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 FAM216BQ8N7L0 139 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 TPRX1Q8N7U7 411 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 OR10P1Q8NGE3 313 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 Q8TCH9 128 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 LRRC29Q8WV35 223 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 RCC1LQ96I51 464 aaKnown RBP3.89□□□□□ -1.79
EDEM3-203ENST00000439962 IMMP2LQ96T52 175 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 ACTR3CQ9C0K3 210 aaPredicted RBP3.89□□□□□ -1.79
EDEM3-203ENST00000439962 RBKSQ9H477 322 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 SAV1Q9H4B6 383 aaPredicted RBP3.89□□□□□ -1.79
EDEM3-203ENST00000439962 ZNF665Q9H7R5 613 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 NAT8Q9UHE5 227 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 RBM7Q9Y580 266 aaKnown RBP3.89□□□□□ -1.79
EDEM3-203ENST00000439962 MDFIC2A0A1B0GVS7 189 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 CLDN34H7C241 214 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 AGPAT2O15120 278 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 CST7O76096 145 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 HBZP02008 142 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 SNRNP70P08621 437 aaKnown RBP3.89□□□□□ -1.79
EDEM3-203ENST00000439962 NDUFB7P17568 137 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 EGR1P18146 543 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 OMGP23515 440 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 SPCS3P61009 180 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 ARF6P62330 175 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 DLK1P80370 383 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 FAM71F2Q6NXP2 309 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 CYP2G1PQ6ZSU1 146 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 ZNRF1Q8ND25 227 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 CORO2AQ92828 525 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 RAB39BQ96DA2 213 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 ANAPC16Q96DE5 110 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 COQ2Q96H96 371 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 TMPRSS5Q9H3S3 457 aa3.89□□□□□ -1.79
EDEM3-203ENST00000439962 TRAV9-1A0A075B6T8 112 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 F6UZH7 168 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 CYB5BO43169 146 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 ZNF737O75373 536 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 GOSR1O95249 250 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 LHBP01229 141 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 MSMBP08118 114 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 HOXB4P17483 251 aaPredicted RBP3.88□□□□□ -1.79
EDEM3-203ENST00000439962 EPHA1P21709 976 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 ACOT6Q3I5F7 207 aaPredicted RBP3.88□□□□□ -1.79
EDEM3-203ENST00000439962 KRBOX4Q5JUW0 171 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 FAM90A2PQ658T7 463 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 Q6ZRM9 215 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 H2BFWTQ7Z2G1 175 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 HAPLN4Q86UW8 402 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 C1orf87Q8N0U7 546 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 C8orf31Q8N9H6 132 aa3.88□□□□□ -1.79
EDEM3-203ENST00000439962 DTD1Q8TEA8 209 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms