RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 USF2Q15853 346 aaPredicted RBP12.67□□□□□ -0.38
APP-208ENST00000439274 HLA-DRB5Q30154 266 aa12.67□□□□□ -0.38
APP-208ENST00000439274 DUX4L9Q6RFH8 374 aaPredicted RBP12.67□□□□□ -0.38
APP-208ENST00000439274 MOGAT3Q86VF5 341 aa12.67□□□□□ -0.38
APP-208ENST00000439274 NOL4LQ96MY1 436 aaPredicted RBP12.67□□□□□ -0.38
APP-208ENST00000439274 IMMP2LQ96T52 175 aa12.67□□□□□ -0.38
APP-208ENST00000439274 CALYQ9NYX4 217 aa12.67□□□□□ -0.38
APP-208ENST00000439274 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
APP-208ENST00000439274 SMG1Q96Q15 3661 aaKnown RBP12.67□□□□□ -0.38
APP-208ENST00000439274 CACNA1GO43497 2377 aa12.67□□□□□ -0.38
APP-208ENST00000439274 SLC17A3O00476 420 aa12.66□□□□□ -0.38
APP-208ENST00000439274 TIMP3P35625 211 aa12.66□□□□□ -0.38
APP-208ENST00000439274 TMPRSS3P57727 454 aa12.66□□□□□ -0.38
APP-208ENST00000439274 EFNB3Q15768 340 aa12.66□□□□□ -0.38
APP-208ENST00000439274 TEX38Q6PEX7 206 aa12.66□□□□□ -0.38
APP-208ENST00000439274 STPG3Q8N7X2 389 aa12.66□□□□□ -0.38
APP-208ENST00000439274 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
APP-208ENST00000439274 OR2V2Q96R30 315 aa12.66□□□□□ -0.38
APP-208ENST00000439274 NDUFAF3Q9BU61 184 aa12.66□□□□□ -0.38
APP-208ENST00000439274 ICE1Q9Y2F5 2266 aa12.66□□□□□ -0.38
APP-208ENST00000439274 LAMA5O15230 3695 aa12.66□□□□□ -0.38
APP-208ENST00000439274 K7EN84 100 aa12.66□□□□□ -0.38
APP-208ENST00000439274 SCGB1D1O95968 90 aa12.66□□□□□ -0.38
APP-208ENST00000439274 GCHFRP30047 84 aa12.66□□□□□ -0.38
APP-208ENST00000439274 ZNF83P51522 516 aa12.66□□□□□ -0.38
APP-208ENST00000439274 VHLLQ6RSH7 139 aa12.66□□□□□ -0.38
APP-208ENST00000439274 DDB2Q92466 427 aa12.66□□□□□ -0.38
APP-208ENST00000439274 HINT2Q9BX68 163 aa12.66□□□□□ -0.38
APP-208ENST00000439274 NPVFQ9HCQ7 196 aa12.66□□□□□ -0.38
APP-208ENST00000439274 F2RL2O00254 374 aa12.65□□□□□ -0.38
APP-208ENST00000439274 TNFSF13O75888 250 aa12.65□□□□□ -0.38
APP-208ENST00000439274 CBLN1P23435 193 aa12.65□□□□□ -0.38
APP-208ENST00000439274 CCKARP32238 428 aa12.65□□□□□ -0.38
APP-208ENST00000439274 TAS2R60P59551 318 aa12.65□□□□□ -0.38
APP-208ENST00000439274 RPL31P62899 125 aaKnown RBP12.65□□□□□ -0.38
APP-208ENST00000439274 CT45A1Q5HYN5 189 aa12.65□□□□□ -0.38
APP-208ENST00000439274 DEFB124Q8NES8 71 aa12.65□□□□□ -0.38
APP-208ENST00000439274 OR10G8Q8NGN5 311 aa12.65□□□□□ -0.38
APP-208ENST00000439274 CT45A3Q8NHU0 189 aa12.65□□□□□ -0.38
APP-208ENST00000439274 ZNF71Q9NQZ8 489 aaPredicted RBP12.65□□□□□ -0.38
APP-208ENST00000439274 SAA2-SAA4A0A096LPE2 208 aa12.65□□□□□ -0.38
APP-208ENST00000439274 C15orf61A6NNL5 157 aa12.65□□□□□ -0.38
APP-208ENST00000439274 SPRY3O43610 288 aa12.65□□□□□ -0.38
APP-208ENST00000439274 CA2P00918 260 aa12.65□□□□□ -0.38
APP-208ENST00000439274 SAA2P0DJI9 122 aaPredicted RBP12.65□□□□□ -0.38
APP-208ENST00000439274 WT1P19544 449 aaPredicted RBP12.65□□□□□ -0.38
APP-208ENST00000439274 CD33P20138 364 aa12.65□□□□□ -0.38
APP-208ENST00000439274 OR4A47Q6IF82 309 aa12.65□□□□□ -0.38
APP-208ENST00000439274 BHLHA15Q7RTS1 189 aaPredicted RBP12.65□□□□□ -0.38
APP-208ENST00000439274 STARD4Q96DR4 205 aa12.65□□□□□ -0.38
APP-208ENST00000439274 PLSCR4Q9NRQ2 329 aa12.65□□□□□ -0.38
APP-208ENST00000439274 FKBP11Q9NYL4 201 aa12.65□□□□□ -0.38
APP-208ENST00000439274 A0A1B0GWJ7 208 aa12.64□□□□□ -0.39
APP-208ENST00000439274 EREGO14944 169 aa12.64□□□□□ -0.39
APP-208ENST00000439274 ACTL6BO94805 426 aa12.64□□□□□ -0.39
APP-208ENST00000439274 FRMD6-AS1P0C7T7 363 aa12.64□□□□□ -0.39
APP-208ENST00000439274 IGFBP2P18065 325 aa12.64□□□□□ -0.39
APP-208ENST00000439274 NPY1RP25929 384 aa12.64□□□□□ -0.39
APP-208ENST00000439274 IQCJQ1A5X6 159 aa12.64□□□□□ -0.39
APP-208ENST00000439274 C17orf58Q2M2W7 97 aa12.64□□□□□ -0.39
APP-208ENST00000439274 SLC24A4Q8NFF2 622 aa12.64□□□□□ -0.39
APP-208ENST00000439274 OR4P4Q8NGL7 312 aa12.64□□□□□ -0.39
APP-208ENST00000439274 OR4S2Q8NH73 311 aa12.64□□□□□ -0.39
APP-208ENST00000439274 CR1LQ2VPA4 569 aa12.64□□□□□ -0.39
APP-208ENST00000439274 TEPPQ6URK8 271 aa12.64□□□□□ -0.39
APP-208ENST00000439274 PPP1R35Q8TAP8 253 aa12.64□□□□□ -0.39
APP-208ENST00000439274 C2orf88Q9BSF0 95 aa12.64□□□□□ -0.39
APP-208ENST00000439274 DKK4Q9UBT3 224 aa12.64□□□□□ -0.39
APP-208ENST00000439274 PROCRQ9UNN8 238 aa12.64□□□□□ -0.39
APP-208ENST00000439274 SPAARA0A1B0GVQ0 90 aa12.63□□□□□ -0.39
APP-208ENST00000439274 AHRRA9YTQ3 701 aa12.63□□□□□ -0.39
APP-208ENST00000439274 CGAP01215 116 aa12.63□□□□□ -0.39
APP-208ENST00000439274 ZNF90Q03938 601 aa12.63□□□□□ -0.39
APP-208ENST00000439274 MOB3BQ86TA1 216 aa12.63□□□□□ -0.39
APP-208ENST00000439274 TUBG2Q9NRH3 451 aa12.63□□□□□ -0.39
APP-208ENST00000439274 SLC25A15Q9Y619 301 aa12.63□□□□□ -0.39
APP-208ENST00000439274 DSCAMO60469 2012 aa12.63□□□□□ -0.39
APP-208ENST00000439274 TRGV8A0A0C4DH27 118 aa12.63□□□□□ -0.39
APP-208ENST00000439274 M0R1B8 84 aa12.63□□□□□ -0.39
APP-208ENST00000439274 SSTP61278 116 aa12.63□□□□□ -0.39
APP-208ENST00000439274 MIR17HGQ75NE6 70 aa12.63□□□□□ -0.39
APP-208ENST00000439274 LYG1Q8N1E2 194 aa12.63□□□□□ -0.39
APP-208ENST00000439274 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
APP-208ENST00000439274 SARAFQ96BY9 339 aa12.63□□□□□ -0.39
APP-208ENST00000439274 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
APP-208ENST00000439274 TP53TG3Q9ULZ0 132 aa12.63□□□□□ -0.39
APP-208ENST00000439274 POLR3KQ9Y2Y1 108 aaPredicted RBP12.63□□□□□ -0.39
APP-208ENST00000439274 GNG10P50151 68 aa12.62□□□□□ -0.39
APP-208ENST00000439274 RHOBP62745 196 aa12.62□□□□□ -0.39
APP-208ENST00000439274 MZT1Q08AG7 82 aa12.62□□□□□ -0.39
APP-208ENST00000439274 OR5I1Q13606 314 aa12.62□□□□□ -0.39
APP-208ENST00000439274 MS4A10Q96PG2 267 aa12.62□□□□□ -0.39
APP-208ENST00000439274 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
APP-208ENST00000439274 CGB3P0DN86 165 aa12.62□□□□□ -0.39
APP-208ENST00000439274 CGB7P0DN87 165 aa12.62□□□□□ -0.39
APP-208ENST00000439274 RAB4BP61018 213 aa12.62□□□□□ -0.39
APP-208ENST00000439274 YPEL3P61236 119 aaPredicted RBP12.62□□□□□ -0.39
APP-208ENST00000439274 HSPE1P61604 102 aaKnown RBP12.62□□□□□ -0.39
APP-208ENST00000439274 SEM1Q6ZVN7 128 aa12.62□□□□□ -0.39
APP-208ENST00000439274 TGIF2LXQ8IUE1 241 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms