RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 FXYD3Q14802 87 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 IGFBP7Q16270 282 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 OR4S2Q8NH73 311 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 ZNF48Q96MX3 618 aaPredicted RBP13.3□□□□□ -0.28
DHFR-201ENST00000439211 PRDM6Q9NQX0 595 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 TRAV38-1A0A0B4J264 116 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 MT-ND6P03923 174 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 NPY1RP25929 384 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 ZNF788Q6ZQV5 615 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 SSC4DQ8WTU2 575 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 TMEM191AQ9H0A3 160 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 KCNIP1Q9NZI2 227 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 ZNF835Q9Y2P0 537 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 TRAV8-6A0A0B4J262 113 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 ARR3P36575 388 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 TCTAP57738 103 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 RPS20P60866 119 aaKnown RBP13.29□□□□□ -0.28
DHFR-201ENST00000439211 RAB31Q13636 194 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 C6orf15Q6UXA7 325 aaPredicted RBP13.29□□□□□ -0.28
DHFR-201ENST00000439211 MUC15Q8N387 334 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 STXBP6Q8NFX7 210 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 OCC1Q8TAD7 63 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 STRADBQ9C0K7 418 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 BMPR1BO00238 502 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 GNB1P62873 340 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 TIGITQ495A1 244 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 ACSM6Q6P461 480 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 RCHY1Q96PM5 261 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 HES7Q9BYE0 225 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 LOXL2Q9Y4K0 774 aa13.29□□□□□ -0.28
DHFR-201ENST00000439211 TRAV26-1A0A087WT03 109 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 FOXI3A8MTJ6 420 aaPredicted RBP13.28□□□□□ -0.28
DHFR-201ENST00000439211 CER1O95813 267 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 HTR1DP28221 377 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 CAMPP49913 170 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 ARL16Q0P5N6 197 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 OR8B8Q15620 311 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 ZNF114Q8NC26 417 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 HS3ST6Q96QI5 342 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 TP53TG3Q9ULZ0 132 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 NUP210LQ5VU65 1888 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 CEACAM3P40198 252 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 RHOGP84095 191 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 ZXDAP98168 799 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 AESQ08117 197 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 Q0VG73 95 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 CXorf67Q86X51 503 aaPredicted RBP13.28□□□□□ -0.28
DHFR-201ENST00000439211 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 LINC00869P0C866 280 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 F2RP25116 425 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 FOXG1P55316 489 aaPredicted RBP13.28□□□□□ -0.28
DHFR-201ENST00000439211 PLPPR2Q96GM1 343 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 PLEKHA3Q9HB20 300 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 OBP2BQ9NPH6 170 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 PILRBQ9UKJ0 227 aa13.28□□□□□ -0.28
DHFR-201ENST00000439211 hDV102S1A0JD36 115 aa13.27□□□□□ -0.28
DHFR-201ENST00000439211 CELA3AP09093 270 aa13.27□□□□□ -0.28
DHFR-201ENST00000439211 TIMP3P35625 211 aa13.27□□□□□ -0.28
DHFR-201ENST00000439211 MAGEA5P43359 124 aa13.27□□□□□ -0.28
DHFR-201ENST00000439211 FGF12P61328 243 aa13.27□□□□□ -0.28
DHFR-201ENST00000439211 OR1A1Q9P1Q5 309 aa13.27□□□□□ -0.28
DHFR-201ENST00000439211 FAM231BA6NCW3 169 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 ZNF716A6NP11 495 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 PGLYRP1O75594 196 aaPredicted RBP13.27□□□□□ -0.29
DHFR-201ENST00000439211 GNG3P63215 75 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 SSX8Q7RTT4 187 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 OR2K2Q8NGT1 345 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 TMEM147Q9BVK8 224 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 ADAMTS9Q9P2N4 1935 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 A6NDN8 102 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 IGKV1D-33P01593 117 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 IGKV1-33P01594 117 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 HIST1H1EP10412 219 aaKnown RBP13.27□□□□□ -0.29
DHFR-201ENST00000439211 ZNF816Q0VGE8 651 aaPredicted RBP13.27□□□□□ -0.29
DHFR-201ENST00000439211 STPG3Q8N7X2 389 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 FAM216AQ8WUB2 273 aa13.27□□□□□ -0.29
DHFR-201ENST00000439211 DNPH1O43598 174 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 SPINK9Q5DT21 86 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 TMEM70Q9BUB7 260 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 PROK2Q9HC23 129 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 OR2W1Q9Y3N9 320 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 VPS13AQ96RL7 3174 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 SCO2A0A1W2PP80 73 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 AHRRA9YTQ3 701 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 K7ESF4 209 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 PAX9P55771 341 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 BVES-AS1Q5T3Y7 98 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 CRIP3Q6Q6R5 217 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 DHRS13Q6UX07 377 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 ATP23Q9Y6H3 246 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 CD5LO43866 347 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 IGLV3-1P01715 115 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 GNG4P50150 75 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 CT55Q8WUE5 264 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 FAM234AQ9H0X4 552 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 DEPPQ9NTK1 212 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 HILPDAQ9Y5L2 63 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 SPCS1Q9Y6A9 102 aa13.26□□□□□ -0.29
DHFR-201ENST00000439211 LOC102723996A0A087X1L8 192 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms