RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CXorf65A6NEN9 183 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 TEX22C9J3V5 150 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 SCAF4O95104 1147 aaKnown RBP5.85□□□□□ -1.47
VPS50-203ENST00000436177 IGHV3-23P01764 117 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 AREGP15514 252 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 HLA-GP17693 338 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 CBLN1P23435 193 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 PSMB6P28072 239 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 ERVK-16P61578 105 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 RPL30P62888 115 aaKnown RBP5.85□□□□□ -1.47
VPS50-203ENST00000436177 MRGPRG-AS1Q2M3A8 158 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 BTNL8Q6UX41 500 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 TPRA1Q86W33 373 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 SLC38A6Q8IZM9 456 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 TMEM61Q8N0U2 210 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 OR13F1Q8NGS4 319 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 OR4A5Q8NH83 315 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 LGALS14Q8TCE9 139 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 NRG4Q8WWG1 115 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 CACNG8Q8WXS5 425 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 FCGR1BQ92637 280 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 BORCS5Q969J3 196 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 MARC2Q969Z3 335 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 MISP3Q96FF7 219 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 WFDC10AQ9H1F0 79 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 Q9H521 79 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 ZC4H2Q9NQZ6 224 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 RHBDL2Q9NX52 303 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 THYN1Q9P016 225 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 ELF5Q9UKW6 265 aaPredicted RBP5.85□□□□□ -1.47
VPS50-203ENST00000436177 SSR3Q9UNL2 185 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 RRP15Q9Y3B9 282 aaKnown RBP5.85□□□□□ -1.47
VPS50-203ENST00000436177 UFC1Q9Y3C8 167 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 S4R3C0 116 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 IGKV1D-13A0A0B4J2D9 117 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 RBMY1BA6NDE4 496 aaKnown RBP5.84□□□□□ -1.47
VPS50-203ENST00000436177 RBMY1EA6NEQ0 496 aaKnown RBP5.84□□□□□ -1.47
VPS50-203ENST00000436177 ZNF785A8K8V0 405 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 A8MWP6 167 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 TNFSF12O43508 249 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 MRPS14O60783 128 aaKnown RBP5.84□□□□□ -1.47
VPS50-203ENST00000436177 NDUFB8O95169 186 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 REG1AP05451 166 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 IL6RP08887 468 aaPredicted RBP5.84□□□□□ -1.47
VPS50-203ENST00000436177 RBMY1DP0C7P1 496 aaKnown RBP5.84□□□□□ -1.47
VPS50-203ENST00000436177 ZNF735P0CB33 412 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 IGKV1-13P0DP09 117 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 MYOD1P15172 320 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 FCGR2CP31995 323 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 GPR183P32249 361 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 MECP2P51608 486 aaKnown RBP5.84□□□□□ -1.47
VPS50-203ENST00000436177 APOC4P55056 127 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 FXYD4P59646 89 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 GABARAPL2P60520 117 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 HERV-K104P61576 105 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 TIMM50Q3ZCQ8 353 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 AADACL3Q5VUY0 350 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 SFXN4Q6P4A7 337 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 PLET1Q6UQ28 207 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 C19orf35Q6ZS72 473 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 GPHB5Q86YW7 130 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 SPAG16Q8N0X2 631 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 PUSL1Q8N0Z8 303 aaKnown RBP5.84□□□□□ -1.47
VPS50-203ENST00000436177 MFSD4AQ8N468 514 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 UXS1Q8NBZ7 420 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 BEST4Q8NFU0 473 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 DMBX1Q8NFW5 382 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 OR1L6Q8NGR2 347 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 CD300LFQ8TDQ1 290 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 CCDC140Q96MF4 163 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 SLC5A7Q9GZV3 580 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 BET1LQ9NYM9 111 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 ETV7Q9Y603 341 aa5.84□□□□□ -1.47
VPS50-203ENST00000436177 SACSQ9NZJ4 4579 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 TRAV18A0A075B6X5 111 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 LOC102724200A0A096LPH7 203 aaPredicted RBP5.83□□□□□ -1.48
VPS50-203ENST00000436177 TRAV25A0A0B4J276 109 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 TMEM213A2RRL7 107 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 SULT1C2O00338 296 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 RBFOX2O43251 390 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS50-203ENST00000436177 PPYP01298 95 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 CLEC3BP05452 202 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 CRYGCP07315 174 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 NQO2P16083 231 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 FGF9P31371 208 aaPredicted RBP5.83□□□□□ -1.48
VPS50-203ENST00000436177 SCAND1P57086 179 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 MXD1Q05195 221 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 PMS2P11Q13670 270 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 MSMO1Q15800 293 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 ZNF585BQ52M93 769 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 THOC7Q6I9Y2 204 aaKnown RBP5.83□□□□□ -1.48
VPS50-203ENST00000436177 LINC00322Q6ZN03 302 aaPredicted RBP5.83□□□□□ -1.48
VPS50-203ENST00000436177 TMEM17Q86X19 198 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 ZBTB34Q8NCN2 500 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 TSPAN14Q8NG11 270 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 OR51H1Q8NH63 302 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 SRSF8Q9BRL6 282 aaKnown RBP5.83□□□□□ -1.48
VPS50-203ENST00000436177 HINT2Q9BX68 163 aa5.83□□□□□ -1.48
VPS50-203ENST00000436177 QTRT1Q9BXR0 403 aaKnown RBP5.83□□□□□ -1.48
VPS50-203ENST00000436177 C6orf62Q9GZU0 229 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms