RNA–Protein interactions for RNA: ENST00000435702.1

AP001046.1-201, humanhuman

TSL 2 BASIC

Gene AP001046.1, Length 2,816 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001046.1-201ENST00000435702 TLE4Q04727 773 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 DNLZQ5SXM8 178 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 ZNF787Q6DD87 383 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 SPNS3Q6ZMD2 512 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 ZNF525Q8N782 197 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 MS4A5Q9H3V2 200 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 TRAV3A0A0B4J244 114 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 B4DEV8 164 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 CYB5BO43169 146 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 SLC25A6P12236 298 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 CFHR2P36980 270 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 TMEM95Q3KNT9 176 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 OR13D1Q8NGV5 346 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 SCGB1C1Q8TD33 95 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 OR4C12Q96R67 309 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 NIPSNAP3BQ9BS92 247 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 MIOXQ9UGB7 285 aa10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 GCN1Q92616 2671 aaKnown RBP10.87□□□□□ -0.67
AP001046.1-201ENST00000435702 TRAV38-1A0A0B4J264 116 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 LOC102723971A0A1B0GUV8 181 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 PPIHO43447 177 aaKnown RBP10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 GATCO43716 136 aaKnown RBP10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 CD81P60033 236 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 RELQ04864 619 aaPredicted RBP10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 HIST2H2BCQ6DN03 193 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 RCC1LQ96I51 464 aaKnown RBP10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 HINT2Q9BX68 163 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 IGHV3-72A0A0B4J1Y9 119 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 KBTBD11-OT1A0A1B0GTJ5 212 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 ZNF672Q499Z4 452 aaPredicted RBP10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 TMEM200BQ69YZ2 307 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 TVP23CQ96ET8 276 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 SDSLQ96GA7 329 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 LIN7CQ9NUP9 197 aaKnown RBP10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 OR6C3Q9NZP0 311 aa10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 HELZ2Q9BYK8 2649 aaKnown RBP10.86□□□□□ -0.67
AP001046.1-201ENST00000435702 SAA2-SAA4A0A096LPE2 208 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 IGKV1D-33P01593 117 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 IGKV1-33P01594 117 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 TRGC2P03986 189 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 SAA2P0DJI9 122 aaPredicted RBP10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 FAM90A2PQ658T7 463 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 RAB40CQ96S21 281 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 TRAV1-1A0A0B4J248 108 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 NKX6-3A6NJ46 265 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 CEBPZOSA8MTT3 80 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 DFFBO76075 338 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 CLEC12BQ2HXU8 276 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 SLC35E3Q7Z769 313 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 GATAD1Q8WUU5 269 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 LSM10Q969L4 123 aaKnown RBP10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 IFI27L2Q9H2X8 130 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 DOK5Q9P104 306 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 PTPN13Q12923 2485 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 B9A039 149 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 NDUFB3O43676 98 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 GOSR1O95249 250 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 DMRT1Q9Y5R6 373 aa10.85□□□□□ -0.67
AP001046.1-201ENST00000435702 HOXA5P20719 270 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 C1orf87Q8N0U7 546 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 EDARADDQ8WWZ3 215 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 DSCAML1Q8TD84 2053 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 ADH4P08319 380 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 BCL2P10415 239 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 DUTP33316 252 aaKnown RBP10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 MRPS11P82912 194 aaKnown RBP10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 PNRC1Q12796 327 aaPredicted RBP10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 KHDC3LQ587J8 217 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 Q8TCH9 128 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 TOLLIPQ9H0E2 274 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 RBKSQ9H477 322 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 SLC25A22Q9H936 323 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 GFOD1Q9NXC2 390 aa10.84□□□□□ -0.67
AP001046.1-201ENST00000435702 RNF212BA8MTL3 300 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 OR9G9P0C7N8 305 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 COX7A1P24310 79 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 CDX1P47902 265 aaPredicted RBP10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 CATR1Q13166 79 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 H2BFWTQ7Z2G1 175 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 NECAP1Q8NC96 275 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 ELOA3CA0A087WX78 387 aaPredicted RBP10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 MARCH11A6NNE9 402 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 IGHV2-70P01814 119 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 IGKV1-16P04430 117 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 SLC38A11Q08AI6 406 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 TEX36Q5VZQ5 186 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 QTRT1Q9BXR0 403 aaKnown RBP10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 TMEM242Q9NWH2 141 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 ZANQ9Y493 2812 aa10.83□□□□□ -0.68
AP001046.1-201ENST00000435702 MAP1LC3B2A6NCE7 125 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 HIST1H2BKO60814 126 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 HIST1H2BJP06899 126 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 APELAP0DMC3 54 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 HIST1H2BOP23527 126 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 HIST1H2BBP33778 126 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 HIST1H2BDP58876 126 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 HIST1H2BCP62807 126 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 HTD2P86397 168 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 HIST2H2BEQ16778 126 aa10.82□□□□□ -0.68
AP001046.1-201ENST00000435702 LRRC75BQ2VPJ9 315 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms