RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 A0A0B4J2A0 478 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 AP4M1O00189 453 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 IL5P05113 134 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 RPL27AP46776 148 aaKnown RBP12.11□□□□□ -0.47
CNOT9-205ENST00000433439 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
CNOT9-205ENST00000433439 Q8N2B8 174 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 C16orf95Q9H693 158 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 SERTAD4Q9NUC0 356 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 SHPKQ9UHJ6 478 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 FBXO7Q9Y3I1 522 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 CUBNO60494 3623 aa12.11□□□□□ -0.47
CNOT9-205ENST00000433439 CLPSL1A2RUU4 121 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 MSGN1A6NI15 193 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 PRAF2O60831 178 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 ADAP1O75689 374 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 NXPH3O95157 252 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 VDAC1P21796 283 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 SSBP2P81877 361 aaPredicted RBP12.1□□□□□ -0.47
CNOT9-205ENST00000433439 FOXL1Q12952 345 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 UNQ5815/PRO19632Q6UWF5 114 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 CENPVQ7Z7K6 275 aaPredicted RBP12.1□□□□□ -0.47
CNOT9-205ENST00000433439 C12orf45Q8N5I9 185 aaPredicted RBP12.1□□□□□ -0.47
CNOT9-205ENST00000433439 MITD1Q8WV92 249 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 SRSF12Q8WXF0 261 aaKnown RBP12.1□□□□□ -0.47
CNOT9-205ENST00000433439 CACNG5Q9UF02 275 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 OR51B2Q9Y5P1 312 aa12.1□□□□□ -0.47
CNOT9-205ENST00000433439 PIGBOS1A0A0B4J2F0 54 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 HMX3A6NHT5 357 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 G3V318 75 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 IL6RP08887 468 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-205ENST00000433439 MAS1LP35410 378 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 COMPP49747 757 aaPredicted RBP12.09□□□□□ -0.47
CNOT9-205ENST00000433439 SPINK9Q5DT21 86 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 GGNBP1Q5YKI7 109 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 Q6ZRM9 215 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 ZNF329Q86UD4 541 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 FAM219AQ8IW50 185 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 STPG2Q8N412 459 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 KLHDC1Q8N7A1 406 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 LRTM2Q8N967 370 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 LFNGQ8NES3 379 aa12.09□□□□□ -0.47
CNOT9-205ENST00000433439 LSM10Q969L4 123 aaKnown RBP12.09□□□□□ -0.47
CNOT9-205ENST00000433439 QTRT1Q9BXR0 403 aaKnown RBP12.09□□□□□ -0.47
CNOT9-205ENST00000433439 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 A0A0B4J293 547 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 TEX50A0A1B0GTY4 177 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 DUXBA0A1W2PPF3 345 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 TMEM89A2RUT3 159 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 C15orf61A6NNL5 157 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 FAM25EA8MYX2 175 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 E7EUB6 86 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 CCSO14618 274 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 IFNA21P01568 189 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 IFNA17P01571 189 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 P0C879 139 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 SULT1A3P0DMM9 295 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 SULT1A4P0DMN0 295 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 EGR2P11161 476 aaPredicted RBP12.08□□□□□ -0.48
CNOT9-205ENST00000433439 OXA1LQ15070 435 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 TATDN3Q17R31 274 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 AWAT1Q58HT5 328 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 THOC7Q6I9Y2 204 aaKnown RBP12.08□□□□□ -0.48
CNOT9-205ENST00000433439 OR1L8Q8NGR8 309 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 OR1S1Q8NH92 325 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 SGMS2Q8NHU3 365 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 FKBP11Q9NYL4 201 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 TMED3Q9Y3Q3 217 aa12.08□□□□□ -0.48
CNOT9-205ENST00000433439 TNCP24821 2201 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 A0A1W2PN81 502 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 PSMB11A5LHX3 300 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 ST8SIA3O43173 380 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 SSNA1O43805 119 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 CHRNA7P36544 502 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 TMEM267Q0VDI3 215 aaPredicted RBP12.07□□□□□ -0.48
CNOT9-205ENST00000433439 SMCO1Q147U7 214 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 NMSQ5H8A3 153 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 C10orf99Q6UWK7 81 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 C11orf44Q8N8P7 122 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 OR5T1Q8NG75 326 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 CHPT1Q8WUD6 406 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 SPIN2AQ99865 258 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 SPIN2BQ9BPZ2 258 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.07□□□□□ -0.48
CNOT9-205ENST00000433439 FOXA2Q9Y261 457 aaPredicted RBP12.07□□□□□ -0.48
CNOT9-205ENST00000433439 ALG5Q9Y673 324 aa12.07□□□□□ -0.48
CNOT9-205ENST00000433439 A0A1B0GUS0 222 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 C5orf51A6NDU8 294 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 MPTX1A8MV57 137 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 IGF1P05019 195 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 TRAPPC2P0DI81 140 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 TRAPPC2BP0DI82 140 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 SLC35B1P78383 322 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 HIST2H2BDQ6DRA6 164 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 CADM3Q8N126 398 aa12.06□□□□□ -0.48
CNOT9-205ENST00000433439 OR10W1Q8NGF6 305 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms