RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ASCL4Q6XD76 172 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 NPIPB11E5RHQ5 1161 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 KBTBD11O94819 623 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 ATP5J2P56134 94 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 Q6ZS92 163 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 C15orf61A6NNL5 157 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 FABP4P15090 132 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 RPL7P18124 248 aaKnown RBP9.69□□□□□ -0.86
PTCH1-208ENST00000430669 LRRC75BQ2VPJ9 315 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 FAM222BQ8WU58 562 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 SLC25A15Q9Y619 301 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 GPX4P36969 197 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-208ENST00000430669 GATAD1Q8WUU5 269 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
PTCH1-208ENST00000430669 FAM209BQ5JX69 171 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 FAM103A1Q9BTL3 118 aaKnown RBP9.69□□□□□ -0.86
PTCH1-208ENST00000430669 DPM3Q9P2X0 92 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 TRAV14DV4A0A0A6YYC5 116 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 MPTX1A8MV57 137 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 IGKV3-15P01624 115 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 KRTDAPP60985 99 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 EEF1AKMT3Q96AZ1 226 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 RABAC1Q9UI14 185 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■■■□ 23.7
PTCH1-208ENST00000430669 APCSP02743 223 aa9.69□□□□□ -0.86
PTCH1-208ENST00000430669 RPL30P62888 115 aaKnown RBP9.69□□□□□ -0.86
PTCH1-208ENST00000430669 MRPL37Q9BZE1 423 aaKnown RBP9.69□□□□□ -0.86
PTCH1-208ENST00000430669 KIR2DL2P43627 348 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-208ENST00000430669 OR13A1Q8NGR1 328 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 ERVH48-1M5A8F1 160 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 ZNF250P15622 560 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 TMEM8BA6NDV4 472 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 NAPSAO96009 420 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 PPOXP50336 477 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 SIGLEC5O15389 551 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 RPL39P5Q59GN2 51 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 LAMTOR1Q6IAA8 161 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 VKORC1L1Q8N0U8 176 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 TUSC1Q2TAM9 212 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 RAB24Q969Q5 203 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 MESP1Q9BRJ9 268 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 ATXN7O15265 892 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-208ENST00000430669 TOX4O94842 621 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 CBLN2Q8IUK8 224 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 CHODLQ9H9P2 273 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 RAXQ9Y2V3 346 aa9.68□□□□□ -0.86
PTCH1-208ENST00000430669 A8MXK9 166 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 OR10J1P30954 320 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 OR4D5Q8NGN0 318 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 ELOBQ15370 118 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 Q5BKY6 102 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 FAM71F2Q6NXP2 309 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 LRP11Q86VZ4 500 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 ST6GALNAC3Q8NDV1 305 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 PRSS3P2Q8NHM4 247 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 LINC01560Q8TB33 94 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 IGKV1-27A0A075B6S5 117 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 ATRXP46100 2492 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 PIP4P1Q86T03 277 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 FGFBP3Q8TAT2 258 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 MS4A10Q96PG2 267 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 RNF126Q9BV68 326 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 MAP1LC3CQ9BXW4 147 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 CARHSP1Q9Y2V2 147 aaKnown RBP9.67□□□□□ -0.86
PTCH1-208ENST00000430669 OR51M1Q9H341 326 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 LOC102723971A0A1B0GUV8 181 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 SNRPEP62304 92 aaKnown RBP9.67□□□□□ -0.86
PTCH1-208ENST00000430669 CYP2G1PQ6ZSU1 146 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 FAM168AQ92567 244 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 ARL2-SNX15V9GYD0 113 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 SAA2-SAA4A0A096LPE2 208 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 SAA2P0DJI9 122 aaPredicted RBP9.67□□□□□ -0.86
PTCH1-208ENST00000430669 LY6G6FQ5SQ64 297 aa9.67□□□□□ -0.86
PTCH1-208ENST00000430669 RNASEKQ6P5S7 137 aaKnown RBP9.67□□□□□ -0.86
PTCH1-208ENST00000430669 RBPMS2Q6ZRY4 209 aaKnown RBP9.67□□□□□ -0.86
PTCH1-208ENST00000430669 FBLL1A6NHQ2 334 aaKnown RBP9.66□□□□□ -0.86
PTCH1-208ENST00000430669 IBA57Q5T440 356 aaKnown RBP9.66□□□□□ -0.86
PTCH1-208ENST00000430669 MIC13Q5XKP0 118 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 OR5AU1Q8NGC0 362 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 SGMS2Q8NHU3 365 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 A0A087WWC5 75 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 OR2T8A6NH00 312 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 DLX6P56179 175 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 ARF6P62330 175 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 ATP5G2Q06055 141 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 FOXF2Q12947 444 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 CLEC12BQ2HXU8 276 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 LDLRAD3Q86YD5 345 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 A0A087WV48 116 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 NDUFB4O95168 129 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 HLA-DQA1P01909 254 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 MEOX2P50222 304 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 IZUMO4Q1ZYL8 232 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 ZNF506Q5JVG8 444 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 PNKDQ8N490 385 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 M0QZK8 103 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 LEAP2Q969E1 77 aa9.66□□□□□ -0.86
PTCH1-208ENST00000430669 TMEM133Q9H2Q1 129 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms