RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 C11orf71Q6IPW1 123 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 ZNF841Q6ZN19 808 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 TMEM170AQ8WVE7 144 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 FLYWCH2Q96CP2 140 aaKnown RBP16.11■□□□□ 0.17
CASC4-203ENST00000429162 ACTR3CQ9C0K3 210 aaPredicted RBP16.11■□□□□ 0.17
CASC4-203ENST00000429162 NBEAQ8NFP9 2946 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 ANKHD1Q8IWZ3 2542 aaKnown RBP16.1■□□□□ 0.17
CASC4-203ENST00000429162 FGF8P55075 233 aaPredicted RBP16.1■□□□□ 0.17
CASC4-203ENST00000429162 RHEBQ15382 184 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 ACOT6Q3I5F7 207 aaPredicted RBP16.1■□□□□ 0.17
CASC4-203ENST00000429162 AVPI1Q5T686 147 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 TGIF2LXQ8IUE1 241 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 OR8B3Q8NGG8 313 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 OR5B3Q8NH48 314 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 LHX4Q969G2 390 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 OR8B2Q96RD0 313 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 HINT2Q9BX68 163 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 SMCO4Q9NRQ5 59 aa16.1■□□□□ 0.17
CASC4-203ENST00000429162 TET2Q6N021 2002 aaPredicted RBP16.1■□□□□ 0.17
CASC4-203ENST00000429162 ZFP92A6NM28 416 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 RBP4P02753 201 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 PMS2P11Q13670 270 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 AKIRIN2Q53H80 203 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 C11orf42Q8N5U0 333 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 OR4C13Q8NGP0 309 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 VSTM2AQ8TAG5 236 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 NEU4Q8WWR8 484 aaPredicted RBP16.09■□□□□ 0.17
CASC4-203ENST00000429162 TIMD4Q96H15 378 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 SLC25A22Q9H936 323 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 MIOXQ9UGB7 285 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 WASHC3Q9Y3C0 194 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 ADGRG4Q8IZF6 3080 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 C4orf17Q53FE4 359 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 OR4A5Q8NH83 315 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 NEIL1Q96FI4 390 aaPredicted RBP16.09■□□□□ 0.17
CASC4-203ENST00000429162 RPS10P5Q9NQ39 176 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 KCNIP2Q9NS61 270 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 DOCK11Q5JSL3 2073 aa16.09■□□□□ 0.17
CASC4-203ENST00000429162 TMEM8BA6NDV4 472 aa16.08■□□□□ 0.16
CASC4-203ENST00000429162 CA2P00918 260 aa16.08■□□□□ 0.16
CASC4-203ENST00000429162 SNRNP70P08621 437 aaKnown RBP16.08■□□□□ 0.16
CASC4-203ENST00000429162 MYOD1P15172 320 aa16.08■□□□□ 0.16
CASC4-203ENST00000429162 ATP5IP56385 69 aaPredicted RBP16.08■□□□□ 0.16
CASC4-203ENST00000429162 FAM122CQ6P4D5 195 aa16.08■□□□□ 0.16
CASC4-203ENST00000429162 TREML4Q6UXN2 200 aa16.08■□□□□ 0.16
CASC4-203ENST00000429162 CYB561D1Q8N8Q1 229 aa16.08■□□□□ 0.16
CASC4-203ENST00000429162 RAB1CQ92928 201 aa16.08■□□□□ 0.16
CASC4-203ENST00000429162 TEX50A0A1B0GTY4 177 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 C7orf77A4D0Y5 90 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 CYB5BO43169 146 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 USF1P22415 310 aaPredicted RBP16.07■□□□□ 0.16
CASC4-203ENST00000429162 MC5RP33032 325 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 Q8N7P7 452 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 C8orf46Q8TAG6 207 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 P2RX4Q99571 388 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 VAX2Q9UIW0 290 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 OPRK1P41145 380 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 CEBPGP53567 150 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 PRRX1P54821 245 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 DIAPH2-AS1Q14236 149 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 RBMS3Q6XE24 437 aaKnown RBP16.07■□□□□ 0.16
CASC4-203ENST00000429162 NPVFQ9HCQ7 196 aa16.07■□□□□ 0.16
CASC4-203ENST00000429162 PUS1Q9Y606 427 aaKnown RBP eCLIP16.07■□□□□ 0.16
CASC4-203ENST00000429162 IGHV2-26A0A0B4J1V2 119 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 PPIAL4CA0A0B4J2A2 164 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 FNDC10F2Z333 226 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 PPIAL4GP0DN37 164 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 TAGLN2P37802 199 aaKnown RBP16.06■□□□□ 0.16
CASC4-203ENST00000429162 RPL8P62917 257 aaKnown RBP16.06■□□□□ 0.16
CASC4-203ENST00000429162 WDR25Q64LD2 544 aaPredicted RBP16.06■□□□□ 0.16
CASC4-203ENST00000429162 DTX2Q86UW9 622 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 TMEM167AQ8TBQ9 72 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 C20orf24Q9BUV8 137 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 COMMD5Q9GZQ3 224 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 hCG_1809904A0A1W2PP81 198 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 A0A1W2PPE2 198 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 A0A1W2PR64 198 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 A0A1W2PRV1 198 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 SOD3P08294 240 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 AGAP20933 346 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 PAX6P26367 422 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 CDC34P49427 236 aaPredicted RBP16.06■□□□□ 0.16
CASC4-203ENST00000429162 MGST2Q99735 147 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 CLEC7AQ9BXN2 247 aa16.06■□□□□ 0.16
CASC4-203ENST00000429162 ATRXP46100 2492 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 KALRNO60229 2985 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 SEC14L6B5MCN3 397 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 FBP1P09467 338 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 HLA-DRB5Q30154 266 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 OR1L8Q8NGR8 309 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 RAB24Q969Q5 203 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 NIPSNAP3BQ9BS92 247 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 GGTLC1Q9BX51 225 aa16.05■□□□□ 0.16
CASC4-203ENST00000429162 H3BQ15 152 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 OPN1MWP04001 364 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 OPN1MW2P0DN77 364 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 OPN1MW3P0DN78 364 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 AKR1C3P42330 323 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 VMA21Q3ZAQ7 101 aa16.04■□□□□ 0.16
CASC4-203ENST00000429162 ARSJQ5FYB0 599 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms