RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 NSD1Q96L73 2696 aaPredicted RBP6.3□□□□□ -1.4
HMGA1P4-201ENST00000428643 HMX3A6NHT5 357 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 CLDN34H7C241 214 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 ST8SIA3O43173 380 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 TCF21O43680 179 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 IFNA17P01571 189 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 HLA-DRB1P01911 266 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 OPN1MWP04001 364 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 CRYGBP07316 175 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 OPN1MW2P0DN77 364 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 OPN1MW3P0DN78 364 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 MYOD1P15172 320 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 MAS1LP35410 378 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 HOXA1P49639 335 aaPredicted RBP6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 COMPP49747 757 aaPredicted RBP6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 H2BFSP57053 126 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 HILS1P60008 231 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 S100A10P60903 97 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 CD83Q01151 205 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 RELBQ01201 579 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 SPINK9Q5DT21 86 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 ARSJQ5FYB0 599 aaPredicted RBP6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 Q6ZRM9 215 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 ARPC1AQ92747 370 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 C2orf50Q96LR7 162 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 FYTTD1Q96QD9 318 aaKnown RBP6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 ZNF436Q9C0F3 470 aaPredicted RBP6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 PARP11Q9NR21 331 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 TMEM14BQ9NUH8 114 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 COA4Q9NYJ1 87 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 FKBP11Q9NYL4 201 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 FOXA2Q9Y261 457 aaPredicted RBP6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR51B2Q9Y5P1 312 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 DNHD1Q96M86 4753 aa6.29□□□□□ -1.4
HMGA1P4-201ENST00000428643 CEBPZOSA8MTT3 80 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 TRIM77I1YAP6 450 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 WRBO00258 174 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 FCN1O00602 326 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 SSSCA1O60232 199 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 FGF2P09038 288 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 GIPP09681 153 aaPredicted RBP6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 TRAPPC2P0DI81 140 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 TRAPPC2BP0DI82 140 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 SLC25A6P12236 298 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 NKX2-1P43699 371 aaPredicted RBP6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 RPL27AP46776 148 aaKnown RBP6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 BCAP31P51572 246 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 UBA52P62987 128 aaKnown RBP6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 CYCSP99999 105 aaKnown RBP6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 NDPQ00604 133 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 FXYD3Q14802 87 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 LRRC37A5PQ49AS3 106 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 AKAP14Q86UN6 197 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR1L8Q8NGR8 309 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 OR5B3Q8NH48 314 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 SRSF12Q8WXF0 261 aaKnown RBP6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 HSPB9Q9BQS6 159 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 MAGT1Q9H0U3 335 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 PLEKHA3Q9HB20 300 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
HMGA1P4-201ENST00000428643 FN1P02751 2386 aaKnown RBP6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 IGHV7-81A0A0B4J1V7 117 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 FAM181BA6NEQ2 426 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 ATP6V0E1O15342 81 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 KCNAB3O43448 404 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 PITX3O75364 302 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 AMY1AP04745 511 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 CRYBA1P05813 215 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 IL6RP08887 468 aaPredicted RBP6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 APELAP0DMC3 54 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 SPCS3P61009 180 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 RAP2BP61225 183 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 HSPE1P61604 102 aaKnown RBP6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 BLCAPP62952 87 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 CX3CL1P78423 397 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 TNFRSF9Q07011 255 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 MRGPRG-AS1Q2M3A8 158 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 CXorf66Q5JRM2 361 aaPredicted RBP6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 SLC35E3Q7Z769 313 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZNF429Q86V71 674 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 MRPL41Q8IXM3 137 aaKnown RBP6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR4D5Q8NGN0 318 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 OR2T35Q8NGX2 323 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 ASB13Q8WXK3 278 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 FAM103A1Q9BTL3 118 aaKnown RBP6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 PRSS22Q9GZN4 317 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 RBKSQ9H477 322 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 HSPB7Q9UBY9 170 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 CACFD1Q9UGQ2 172 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 ZNF257Q9Y2Q1 563 aa6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 LSM5Q9Y4Y9 91 aaKnown RBP6.27□□□□□ -1.41
HMGA1P4-201ENST00000428643 TEX50A0A1B0GTY4 177 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 A0A1W2PN81 502 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 MSGN1A6NI15 193 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 FAM90A26D6RGX4 464 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 L7N2F9 121 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 MED6O75586 246 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 CCNKO75909 580 aa6.26□□□□□ -1.41
HMGA1P4-201ENST00000428643 MBPP02686 304 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms