RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 THYN1Q9P016 225 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 EXTL2Q9UBQ6 330 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 TGP01266 2768 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 C13orf42A0A1B0GVH6 325 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 MARCH11A6NNE9 402 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 TEX22C9J3V5 150 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 UPK2O00526 184 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 OVOL1O14753 267 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 IFNA6P05013 189 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 PTHLHP12272 177 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 CTRB1P17538 263 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 HLA-GP17693 338 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 RPL27AP46776 148 aaKnown RBP7.05□□□□□ -1.28
SMC1A-203ENST00000428014 TPPP2P59282 170 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 ERVK-16P61578 105 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 DGCR2P98153 550 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 TNXAQ16473 311 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 TATDN3Q17R31 274 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 CTRB2Q6GPI1 263 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 ACSM6Q6P461 480 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 OR2K2Q8NGT1 345 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 ABHD5Q8WTS1 349 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 FYTTD1Q96QD9 318 aaKnown RBP7.05□□□□□ -1.28
SMC1A-203ENST00000428014 MIXL1Q9H2W2 232 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 GNB4Q9HAV0 340 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 PRNDQ9UKY0 176 aa7.05□□□□□ -1.28
SMC1A-203ENST00000428014 PRKDCP78527 4128 aaKnown RBP7.05□□□□□ -1.28
SMC1A-203ENST00000428014 DNAH3Q8TD57 4116 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.04□□□□□ -1.28
SMC1A-203ENST00000428014 H0Y980 276 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 RGS5O15539 181 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 PMP2P02689 132 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 HLA-DMAP28067 261 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 PSMB6P28072 239 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 ETV6P41212 452 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 FXYD4P59646 89 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 GNB1P62873 340 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 KLF5Q13887 457 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-203ENST00000428014 AARDQ4LEZ3 155 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 ZNF585BQ52M93 769 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 LINC00299Q6ZSB3 139 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 C18orf65Q6ZTR6 163 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 SNX29P2Q8IUI4 249 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 FAM219AQ8IW50 185 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 OR1L8Q8NGR8 309 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 OR52I2Q8NH67 350 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 CXorf58Q96LI9 332 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 SCGB3A2Q96PL1 93 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 CLCC1Q96S66 551 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 PHB2Q99623 299 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 PRRT1Q99946 306 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 FAM103A1Q9BTL3 118 aaKnown RBP7.04□□□□□ -1.28
SMC1A-203ENST00000428014 ELOVL1Q9BW60 279 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 QTRT1Q9BXR0 403 aaKnown RBP7.04□□□□□ -1.28
SMC1A-203ENST00000428014 COMMD5Q9GZQ3 224 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 FXYD6Q9H0Q3 95 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 TMEM14BQ9NUH8 114 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 AURKAIP1Q9NWT8 199 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-203ENST00000428014 PTTG2Q9NZH5 202 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 PEF1Q9UBV8 284 aaKnown RBP7.04□□□□□ -1.28
SMC1A-203ENST00000428014 KLK11Q9UBX7 282 aa7.04□□□□□ -1.28
SMC1A-203ENST00000428014 TRBV7-1A0A0A6YYK4 115 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 SEC14L6B5MCN3 397 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 LGALS9O00182 355 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 CTDSP2O14595 271 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 CD3DP04234 171 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 CTSDP07339 412 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-203ENST00000428014 FCGR2BP31994 310 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-203ENST00000428014 AP3S2P59780 193 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 OR2B8PP59922 312 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 CNPY1Q3B7I2 92 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 STEAP1BQ6NZ63 245 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 LAX1Q8IWV1 398 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 GDPD1Q8N9F7 314 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 CCDC71LQ8N9Z2 235 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 ZNF114Q8NC26 417 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 OR6Q1Q8NGQ2 317 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 VN1R17PQ8TDU5 208 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 DIRAS2Q96HU8 199 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 TMEM56Q96MV1 263 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
SMC1A-203ENST00000428014 GAR1Q9NY12 217 aaKnown RBP7.03□□□□□ -1.28
SMC1A-203ENST00000428014 IGLV11-55A0A075B6I3 123 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 IGLC7A0M8Q6 106 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 ANKRD20A5PA0PJZ0 165 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 MEIS3P1A6NDR6 274 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 A8MZ25 164 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 MPPED1O15442 326 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 SNAPC5O75971 98 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 RAB3DO95716 219 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 IGLV1-51P01701 117 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 RLN1P04808 185 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 AKAIN1P0CW23 69 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 TRAPPC2P0DI81 140 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 TRAPPC2BP0DI82 140 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 UCP1P25874 307 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 HOXD3P31249 432 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-203ENST00000428014 FAUP35544 74 aaKnown RBP7.02□□□□□ -1.29
SMC1A-203ENST00000428014 RHOGP84095 191 aa7.02□□□□□ -1.29
SMC1A-203ENST00000428014 ATP5G2Q06055 141 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms