RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
LSG1-202ENST00000427461 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 IGHV3-66A0A0C4DH42 116 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 RPS10-NUDT3A0A1W2PQS6 291 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 NUPL2O15504 423 aaKnown RBP6.38□□□□□ -1.39
LSG1-202ENST00000427461 FCGR3BO75015 233 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 NUDT3O95989 172 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 APOHP02749 345 aaPredicted RBP6.38□□□□□ -1.39
LSG1-202ENST00000427461 HTR2CP28335 458 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 TPBGQ13641 420 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 OR2B11Q5JQS5 317 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 ACTL10Q5JWF8 245 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 MOB1BQ7L9L4 216 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 UBAC2Q8NBM4 344 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 OR8J1Q8NGP2 316 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 ANAPC16Q96DE5 110 aa6.38□□□□□ -1.39
LSG1-202ENST00000427461 BSCL2Q96G97 398 aaPredicted RBP6.38□□□□□ -1.39
LSG1-202ENST00000427461 PKHD1L1Q86WI1 4243 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 A0A1W2PPK0 400 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 KBTBD11O94819 623 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 IFNA5P01569 189 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 CRHBPP24387 322 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 GBX2P52951 348 aaPredicted RBP6.37□□□□□ -1.39
LSG1-202ENST00000427461 CCL18P55774 89 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 OR2B8PP59922 312 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 RPL11P62913 178 aaKnown RBP6.37□□□□□ -1.39
LSG1-202ENST00000427461 CDPF1Q6NVV7 123 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
LSG1-202ENST00000427461 SYS1Q8N2H4 156 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 TMEM167AQ8TBQ9 72 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 VN1R17PQ8TDU5 208 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 ST8SIA2Q92186 375 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 KCNK15Q9H427 330 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 Q9N2K0 584 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 ZNF446Q9NWS9 450 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 RABAC1Q9UI14 185 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 AK3Q9UIJ7 227 aa6.37□□□□□ -1.39
LSG1-202ENST00000427461 IGHV3OR16-12A0A075B7B8 117 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 TRAV14DV4A0A0A6YYC5 116 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 TRBV6-6A0A0A6YYG2 114 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 ST8SIA3O43173 380 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 ATP8B1O43520 1251 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 YIF1AO95070 293 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 ZNF688P0C7X2 276 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 ATP6AP1Q15904 470 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 SPSB3Q6PJ21 355 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 SSX7Q7RTT5 188 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 DEFB104AQ8WTQ1 72 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 CCDC124Q96CT7 223 aaKnown RBP6.36□□□□□ -1.39
LSG1-202ENST00000427461 LGALS12Q96DT0 336 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 NRBF2Q96F24 287 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 Q9H3A6 140 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 ARGLU1Q9NWB6 273 aaPredicted RBP6.36□□□□□ -1.39
LSG1-202ENST00000427461 IMPAD1Q9NX62 359 aa6.36□□□□□ -1.39
LSG1-202ENST00000427461 EXOGQ9Y2C4 368 aaKnown RBP6.36□□□□□ -1.39
LSG1-202ENST00000427461 A0A0A6YYD4 124 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 IGLC7A0M8Q6 106 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 TMEM189A5PLL7 270 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 ZNF705FA8MVS1 300 aaPredicted RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 BET1O15155 118 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 FKBP6O75344 327 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 CTSGP08311 255 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 ZNF705DP0CH99 300 aaPredicted RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 ZNF705BP0CI00 300 aaPredicted RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 DNAH10OSP0CZ25 163 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 LINC00315P59091 139 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 RPL30P62888 115 aaKnown RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 ARFRP1Q13795 201 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 OXA1LQ15070 435 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 IGSF11Q5DX21 431 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 TTC32Q5I0X7 151 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 KDM4DQ6B0I6 523 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 SLC25A24Q6NUK1 477 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 GSG1LQ6UXU4 331 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 ZNF705AQ6ZN79 300 aaPredicted RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 PUSL1Q8N0Z8 303 aaKnown RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 OR10W1Q8NGF6 305 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 SCARB1Q8WTV0 552 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 DGCR14Q96DF8 476 aaKnown RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 ADTRPQ96IZ2 230 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 OR10C1Q96KK4 312 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 RIMS4Q9H426 269 aaPredicted RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 PLEKHJ1Q9NW61 149 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 ERVK13-1Q9NX77 482 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 ZNF586Q9NXT0 402 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 C21orf62Q9NYP8 219 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 THYN1Q9P016 225 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 TAGLN3Q9UI15 199 aa6.35□□□□□ -1.39
LSG1-202ENST00000427461 RBM7Q9Y580 266 aaKnown RBP6.35□□□□□ -1.39
LSG1-202ENST00000427461 J3QRK9 145 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 K7EQG2 157 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 SOCS1O15524 211 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 PRB4P10163 310 aaPredicted RBP6.34□□□□□ -1.39
LSG1-202ENST00000427461 ASIPP42127 132 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 DAD1P61803 113 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 MRPL28Q13084 256 aaKnown RBP6.34□□□□□ -1.39
LSG1-202ENST00000427461 USF2Q15853 346 aaPredicted RBP6.34□□□□□ -1.39
LSG1-202ENST00000427461 Q56UQ5 140 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 LRRTM1Q86UE6 522 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms