RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 NCOA6Q14686 2063 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 A0A087WUU8 490 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR5K4A6NMS3 321 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 C4orf51C9J302 202 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 BOLA2-SMG1P6H3BVE0 249 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 K7EN84 100 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 K7EQS6 105 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ENTPD6O75354 484 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 SC5DO75845 299 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 RAB36O95755 333 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 IGF2P01344 180 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 APOA1P02647 267 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 HMGN1P05114 100 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 HMGN2P05204 90 aaKnown RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 DBIP07108 87 aaKnown RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 LIMS3P0CW19 117 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 LIMS4P0CW20 117 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR12D1P0DN82 309 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 HIST1H1TP22492 207 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 CD34P28906 385 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 S100A5P33763 92 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 HTR2BP41595 481 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 SSR2P43308 183 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 EVX1P49640 407 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ATP5J2P56134 94 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 CTBP2P56545 445 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 FXYD6P3P58550 94 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 LSM3P62310 102 aaKnown RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 PPP3R1P63098 170 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 PSPHP78330 225 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 MEF2CQ06413 473 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 SLAMF1Q13291 335 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 C1DQ13901 141 aaKnown RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 TRAM1Q15629 374 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 NDUFA5Q16718 116 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ACTBL2Q562R1 376 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 PYDC2Q56P42 97 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 AADACL4Q5VUY2 407 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 HACD4Q5VWC8 232 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ZFAND6Q6FIF0 208 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 RPL13AP3Q6NVV1 102 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 TNFAIP8L2Q6P589 184 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 XKRXQ6PP77 449 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 VN1R4Q7Z5H5 301 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 COMTD1Q86VU5 262 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 RBM45Q8IUH3 476 aaKnown RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 LRRC25Q8N386 305 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 GDPD1Q8N9F7 314 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ZFP62Q8NB50 900 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR5D16Q8NGK9 328 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR8D4Q8NGM9 314 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR4C13Q8NGP0 309 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR9Q1Q8NGQ5 310 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR6K3Q8NGY3 331 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR6N2Q8NGY6 317 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR51Q1Q8NH59 317 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR5AK3PQ8NH89 298 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 CDC26Q8NHZ8 85 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 PIGXQ8TBF5 258 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ACOT12Q8WYK0 555 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 RAB8BQ92930 207 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 KCTD7Q96MP8 289 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR2V2Q96R30 315 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR7D2Q96RA2 312 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 STACQ99469 402 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 SDF2Q99470 211 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 PRSS27Q9BQR3 290 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 TM2D3Q9BRN9 247 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ANAPC13Q9BS18 74 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF426Q9BUY5 554 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 TSSK6Q9BXA6 273 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 C6orf62Q9GZU0 229 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 OR51E2Q9H255 320 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 MIXL1Q9H2W2 232 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 VSIRQ9H7M9 311 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 TRIM45Q9H8W5 580 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 FAM60AQ9NP50 221 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 CMC2Q9NRP2 79 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 C14orf105Q9NVL8 296 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ASF1BQ9NVP2 202 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 TXNL4BQ9NX01 149 aaKnown RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 FBXL12Q9NXK8 326 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 TVP23BQ9NYZ1 205 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF230Q9UIE0 474 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 SSR3Q9UNL2 185 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 BAIAP2Q9UQB8 552 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 KLF13Q9Y2Y9 288 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF706Q9Y5V0 76 aaPredicted RBP1.22□□□□□ -2.21
PTPRC-208ENST00000427110 V9GYH0 126 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 CACNA1EQ15878 2313 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 KNL1Q8NG31 2342 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 LAMA3Q16787 3333 aa1.22□□□□□ -2.21
PTPRC-208ENST00000427110 CACNA1CQ13936 2221 aa1.21□□□□□ -2.21
PTPRC-208ENST00000427110 ASCC3Q8N3C0 2202 aaKnown RBP1.21□□□□□ -2.21
PTPRC-208ENST00000427110 ALPK2Q86TB3 2170 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 TRAV1-2A0A0B4J238 106 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 A0A0J9YY10 115 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 LOC100506127A0A0U1RQW1 187 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 KIR2DS1A0A191URI9 304 aa1.21□□□□□ -2.22
PTPRC-208ENST00000427110 LOC389332A0A1B0GUA5 103 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms