RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TNXAQ16473 311 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 ZNF585BQ52M93 769 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 SSX9Q7RTT3 188 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 TCTEX1D1Q8N7M0 179 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 POC5Q8NA72 575 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 OSR1Q8TAX0 266 aaPredicted RBP9.8□□□□□ -0.84
GPC1-204ENST00000426280 BORCS5Q969J3 196 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 PRRT1Q99946 306 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 RTBDNQ9BSG5 229 aaPredicted RBP9.8□□□□□ -0.84
GPC1-204ENST00000426280 ZNF355PQ9NSJ1 428 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 SLC2A8Q9NY64 477 aa9.8□□□□□ -0.84
GPC1-204ENST00000426280 TRAV3A0A0B4J244 114 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 ANKRD34BA5PLL1 514 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 HMX3A6NHT5 357 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 CGB1A6NKQ9 187 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 LINC01619G3V211 115 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 CTSDP07339 412 aaPredicted RBP9.79□□□□□ -0.84
GPC1-204ENST00000426280 IL6RP08887 468 aaPredicted RBP9.79□□□□□ -0.84
GPC1-204ENST00000426280 OR8U8P0C7N1 319 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 F2RP25116 425 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 FAUP35544 74 aaKnown RBP9.79□□□□□ -0.84
GPC1-204ENST00000426280 ECI1P42126 302 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 KIR2DS2P43631 304 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 LPAR6P43657 344 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 AP3S2P59780 193 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 VMA21Q3ZAQ7 101 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 C9orf66Q5T8R8 295 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 C11orf87Q6NUJ2 197 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 LINC00299Q6ZSB3 139 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 HAPLN4Q86UW8 402 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 PUSL1Q8N0Z8 303 aaKnown RBP9.79□□□□□ -0.84
GPC1-204ENST00000426280 ADAD2Q8NCV1 583 aaKnown RBP9.79□□□□□ -0.84
GPC1-204ENST00000426280 ZFAND1Q8TCF1 268 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 SRSF12Q8WXF0 261 aaKnown RBP9.79□□□□□ -0.84
GPC1-204ENST00000426280 DPF1Q92782 380 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 C5orf66Q9H5L9 145 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 SCP2D1Q9UJQ7 156 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 GPR132Q9UNW8 380 aa9.79□□□□□ -0.84
GPC1-204ENST00000426280 LSM4Q9Y4Z0 139 aaKnown RBP9.79□□□□□ -0.84
GPC1-204ENST00000426280 OVOL1O14753 267 aa9.78□□□□□ -0.84
GPC1-204ENST00000426280 MPPED1O15442 326 aa9.78□□□□□ -0.84
GPC1-204ENST00000426280 RBFOX2O43251 390 aaKnown RBP eCLIP9.78□□□□□ -0.84
GPC1-204ENST00000426280 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
GPC1-204ENST00000426280 CCR6P51684 374 aa9.78□□□□□ -0.84
GPC1-204ENST00000426280 RND3P61587 244 aa9.78□□□□□ -0.84
GPC1-204ENST00000426280 SP6Q3SY56 376 aa9.78□□□□□ -0.84
GPC1-204ENST00000426280 S100ZQ8WXG8 99 aa9.78□□□□□ -0.84
GPC1-204ENST00000426280 ZNF486Q96H40 463 aaPredicted RBP9.78□□□□□ -0.84
GPC1-204ENST00000426280 TP53RKQ96S44 253 aa9.78□□□□□ -0.84
GPC1-204ENST00000426280 COPZ2Q9P299 210 aa9.78□□□□□ -0.84
GPC1-204ENST00000426280 C14orf166Q9Y224 244 aaKnown RBP9.78□□□□□ -0.84
GPC1-204ENST00000426280 DNAH9Q9NYC9 4486 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 TEX22C9J3V5 150 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 PLA2G10O15496 165 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 HPRT1P00492 218 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 IGKV1-39P01597 117 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 IGKV1D-39P04432 117 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 S100GP29377 79 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 CD40LGP29965 261 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 ZNF846Q147U1 533 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 TMEM230Q96A57 120 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 SLA2Q9H6Q3 261 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 COA4Q9NYJ1 87 aa9.77□□□□□ -0.85
GPC1-204ENST00000426280 OR2A4O95047 310 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 HRASP01112 189 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 OR9G9P0C7N8 305 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 BTCP35070 178 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 G6PCP35575 357 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 TAS2R31P59538 309 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 SURF2Q15527 256 aaPredicted RBP9.76□□□□□ -0.85
GPC1-204ENST00000426280 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 ACSM6Q6P461 480 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 IL34Q6ZMJ4 242 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 CCDC71LQ8N9Z2 235 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 TMEM167AQ8TBQ9 72 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 CD300LFQ8TDQ1 290 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 OR2A7Q96R45 310 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 PHB2Q99623 299 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 WDR12Q9GZL7 423 aaKnown RBP9.76□□□□□ -0.85
GPC1-204ENST00000426280 PLEKHA2Q9HB19 425 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 DMRT1Q9Y5R6 373 aa9.76□□□□□ -0.85
GPC1-204ENST00000426280 TRBV9A0A0B4J1U6 114 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 TEX13DA0A0J9YY54 714 aaPredicted RBP9.75□□□□□ -0.85
GPC1-204ENST00000426280 C3orf85A0A1B0GTC6 90 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 H0Y980 276 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 H3BUA1 57 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 KBTBD11O94819 623 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 BRI3O95415 125 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 KRASP01116 189 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 OR5AC1P0C628 307 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 AREGP15514 252 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 NQO2P16083 231 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 SPNP16150 400 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 IFITM3Q01628 133 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 KLF5Q13887 457 aaPredicted RBP9.75□□□□□ -0.85
GPC1-204ENST00000426280 ZNF343Q6P1L6 599 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 TMED4Q7Z7H5 227 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 MMD2Q8IY49 270 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 TTC9CQ8N5M4 171 aa9.75□□□□□ -0.85
GPC1-204ENST00000426280 DMBX1Q8NFW5 382 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms