RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 SEPSECSQ9HD40 501 aaKnown RBP11.11□□□□□ -0.63
USP42-203ENST00000426246 ZNF729A6NN14 1252 aaPredicted RBP11.11□□□□□ -0.63
USP42-203ENST00000426246 TCTAP57738 103 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A10PA6NDY2 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A18PA6NE21 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A16PA6NEW6 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A20PA6NIJ5 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A8PA6NJQ4 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A7PA6NKC0 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A22PA8MWA6 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A12PA8MX19 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A5PA8MXJ8 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A23PA8MXZ1 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A15PP0C7V4 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A13PP0C7W8 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A14PP0C7W9 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM90A24PP0C7X0 464 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 HIST1H1BP16401 226 aaKnown RBP11.11□□□□□ -0.63
USP42-203ENST00000426246 NHLH1Q02575 133 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 OR8I2Q8N0Y5 310 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 FAM216BQ8N7L0 139 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 TMEM140Q9NV12 185 aa11.11□□□□□ -0.63
USP42-203ENST00000426246 CAMPP49913 170 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 ACP7Q6ZNF0 438 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 DMRTC2Q8IXT2 367 aaPredicted RBP11.1□□□□□ -0.63
USP42-203ENST00000426246 NAT8BQ9UHF3 227 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 WIPI2Q9Y4P8 454 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 HRASP01112 189 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 PAX6P26367 422 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 IL3RAP26951 378 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 CRYBB3P26998 211 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 GNB1P62873 340 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 RPL31P62899 125 aaKnown RBP11.1□□□□□ -0.63
USP42-203ENST00000426246 IGFL3Q6UXB1 125 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 Q8IYB0 196 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 CD177Q8N6Q3 437 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 OR8G5Q8NG78 346 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 TBX15Q96SF7 602 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 ZNF71Q9NQZ8 489 aaPredicted RBP11.1□□□□□ -0.63
USP42-203ENST00000426246 PROCRQ9UNN8 238 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 IGFBP2P18065 325 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 PAX5Q02548 391 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 MOB1BQ7L9L4 216 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 SAXO1Q8IYX7 474 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 LSM10Q969L4 123 aaKnown RBP11.1□□□□□ -0.63
USP42-203ENST00000426246 UHRF2Q96PU4 802 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 TAAR6Q96RI8 345 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 TPPP3Q9BW30 176 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 PKIBQ9C010 78 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 CXXC4Q9H2H0 198 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 PRDM13Q9H4Q3 707 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 CACNA1AO00555 2505 aa11.1□□□□□ -0.63
USP42-203ENST00000426246 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 OR10W1Q8NGF6 305 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 RNASE7Q9H1E1 156 aaKnown RBP11.09□□□□□ -0.63
USP42-203ENST00000426246 DOPEY2Q9Y3R5 2298 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 SNURFLB1AK76 121 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 NUPR1O60356 82 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 NPPCP23582 126 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 CNN1P51911 297 aaKnown RBP11.09□□□□□ -0.63
USP42-203ENST00000426246 FAM27E3Q08E93 113 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 CYP2G1PQ6ZSU1 146 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 FKBP11Q9NYL4 201 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 OR6C3Q9NZP0 311 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 A6NNC1 897 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 MRPS11P82912 194 aaKnown RBP11.09□□□□□ -0.63
USP42-203ENST00000426246 GUSBP1Q15486 140 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 OCC1Q8TAD7 63 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 ASCL2Q99929 193 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 C11orf1Q9H5F2 150 aa11.09□□□□□ -0.63
USP42-203ENST00000426246 TRAV17A0A0B4J275 112 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 ZNF134P52741 427 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 GABRA6Q16445 453 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 C10orf55Q5SWW7 151 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 PQLC2Q6ZP29 291 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 ERASQ7Z444 233 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 LINC00479Q96M42 142 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 HSPB9Q9BQS6 159 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 MANBALQ9NQG1 85 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 CLCF1Q9UBD9 225 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 PPIAL4AQ9Y536 164 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 B4DEV8 164 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 K7EM74 188 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.64
USP42-203ENST00000426246 SELENOVP59797 346 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 RAB31Q13636 194 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 HLA-DRB5Q30154 266 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 FAM19A2Q8N3H0 131 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 OR10G8Q8NGN5 311 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 IGFBPL1Q8WX77 278 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 CIB3Q96Q77 187 aaPredicted RBP11.08□□□□□ -0.64
USP42-203ENST00000426246 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 SETD2Q9BYW2 2564 aaPredicted RBP11.08□□□□□ -0.64
USP42-203ENST00000426246 GZMBP10144 247 aa11.08□□□□□ -0.64
USP42-203ENST00000426246 GMPPAQ96IJ6 420 aaPredicted RBP11.08□□□□□ -0.64
USP42-203ENST00000426246 SMDT1Q9H4I9 107 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms