RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 AWAT1Q58HT5 328 aa19.02■□□□□ 0.64
APOE-202ENST00000425718 Q6ZS46 218 aa19.02■□□□□ 0.64
APOE-202ENST00000425718 STPG2Q8N412 459 aa19.02■□□□□ 0.64
APOE-202ENST00000425718 OR5B3Q8NH48 314 aa19.02■□□□□ 0.64
APOE-202ENST00000425718 SRSF8Q9BRL6 282 aaKnown RBP19.02■□□□□ 0.64
APOE-202ENST00000425718 C15orf61A6NNL5 157 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 ATP6V0E1O15342 81 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 PJVKQ0ZLH3 352 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 AKIRIN2Q53H80 203 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 HSD17B13Q7Z5P4 300 aaPredicted RBP19.01■□□□□ 0.63
APOE-202ENST00000425718 CENPVQ7Z7K6 275 aaPredicted RBP19.01■□□□□ 0.63
APOE-202ENST00000425718 SLC35G3Q8N808 338 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 OR1L8Q8NGR8 309 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 LHFPL5Q8TAF8 219 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 ZNF431Q8TF32 576 aaPredicted RBP19.01■□□□□ 0.63
APOE-202ENST00000425718 SRSF12Q8WXF0 261 aaKnown RBP19.01■□□□□ 0.63
APOE-202ENST00000425718 PDCD10Q9BUL8 212 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 WNT10AQ9GZT5 417 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 ZNF257Q9Y2Q1 563 aa19.01■□□□□ 0.63
APOE-202ENST00000425718 TET2Q6N021 2002 aaPredicted RBP19.01■□□□□ 0.63
APOE-202ENST00000425718 IFNA21P01568 189 aa19■□□□□ 0.63
APOE-202ENST00000425718 IGKV1-5P01602 117 aa19■□□□□ 0.63
APOE-202ENST00000425718 P0C879 139 aa19■□□□□ 0.63
APOE-202ENST00000425718 PROK1P58294 105 aa19■□□□□ 0.63
APOE-202ENST00000425718 ZNF429Q86V71 674 aa19■□□□□ 0.63
APOE-202ENST00000425718 MINDY2Q8NBR6 621 aa19■□□□□ 0.63
APOE-202ENST00000425718 GRPEL2Q8TAA5 225 aa19■□□□□ 0.63
APOE-202ENST00000425718 MITD1Q8WV92 249 aa19■□□□□ 0.63
APOE-202ENST00000425718 TMEM14BQ9NUH8 114 aa19■□□□□ 0.63
APOE-202ENST00000425718 FOXA2Q9Y261 457 aaPredicted RBP19■□□□□ 0.63
APOE-202ENST00000425718 TRAV41A0A0B4J266 112 aa18.99■□□□□ 0.63
APOE-202ENST00000425718 PSMB11A5LHX3 300 aa18.99■□□□□ 0.63
APOE-202ENST00000425718 SLC25A6P12236 298 aa18.99■□□□□ 0.63
APOE-202ENST00000425718 MRGPRG-AS1Q2M3A8 158 aa18.99■□□□□ 0.63
APOE-202ENST00000425718 ANKRD55Q3KP44 614 aa18.99■□□□□ 0.63
APOE-202ENST00000425718 C12orf54Q6X4T0 127 aa18.99■□□□□ 0.63
APOE-202ENST00000425718 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.99■□□□□ 0.63
APOE-202ENST00000425718 COA4Q9NYJ1 87 aa18.99■□□□□ 0.63
APOE-202ENST00000425718 OR51B2Q9Y5P1 312 aa18.99■□□□□ 0.63
APOE-202ENST00000425718 SNRPGP15A8MWD9 76 aa18.98■□□□□ 0.63
APOE-202ENST00000425718 OR9G9P0C7N8 305 aa18.98■□□□□ 0.63
APOE-202ENST00000425718 SULT1A3P0DMM9 295 aa18.98■□□□□ 0.63
APOE-202ENST00000425718 SULT1A4P0DMN0 295 aa18.98■□□□□ 0.63
APOE-202ENST00000425718 KLHDC1Q8N7A1 406 aa18.98■□□□□ 0.63
APOE-202ENST00000425718 OR4X2Q8NGF9 303 aa18.98■□□□□ 0.63
APOE-202ENST00000425718 QTRT1Q9BXR0 403 aaKnown RBP18.98■□□□□ 0.63
APOE-202ENST00000425718 A0A1B0GU03 582 aa18.97■□□□□ 0.63
APOE-202ENST00000425718 NDPQ00604 133 aa18.97■□□□□ 0.63
APOE-202ENST00000425718 TMEM95Q3KNT9 176 aa18.97■□□□□ 0.63
APOE-202ENST00000425718 UNQ5815/PRO19632Q6UWF5 114 aa18.97■□□□□ 0.63
APOE-202ENST00000425718 OR5M8Q8NGP6 311 aa18.97■□□□□ 0.63
APOE-202ENST00000425718 COL6A5A8TX70 2615 aa18.97■□□□□ 0.63
APOE-202ENST00000425718 A0A1W2PN81 502 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 HAX1O00165 279 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 TRAPPC2P0DI81 140 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 TRAPPC2BP0DI82 140 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 CHRNA7P36544 502 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 SMCO1Q147U7 214 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 ECSCRQ19T08 205 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 NMSQ5H8A3 153 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 TEX38Q6PEX7 206 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 LYZL2Q7Z4W2 148 aa18.96■□□□□ 0.63
APOE-202ENST00000425718 C12orf45Q8N5I9 185 aaPredicted RBP18.96■□□□□ 0.63
APOE-202ENST00000425718 TRAV3A0A0B4J244 114 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 MSGN1A6NI15 193 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 LINC01548A6NM66 108 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 H3BUA1 57 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 CYB5BO43169 146 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 HSPE1P61604 102 aaKnown RBP18.95■□□□□ 0.62
APOE-202ENST00000425718 SSBP2P81877 361 aaPredicted RBP18.95■□□□□ 0.62
APOE-202ENST00000425718 LFNGQ8NES3 379 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 OR52E5Q8NH55 327 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 TAF15Q92804 592 aaKnown RBP eCLIP18.95■□□□□ 0.62
APOE-202ENST00000425718 GPR146Q96CH1 333 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 NOL4LQ96MY1 436 aaPredicted RBP18.95■□□□□ 0.62
APOE-202ENST00000425718 FYTTD1Q96QD9 318 aaKnown RBP18.95■□□□□ 0.62
APOE-202ENST00000425718 PRR13Q9NZ81 148 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 CACNG5Q9UF02 275 aa18.95■□□□□ 0.62
APOE-202ENST00000425718 ELANEP08246 267 aa18.94■□□□□ 0.62
APOE-202ENST00000425718 EGR2P11161 476 aaPredicted RBP18.94■□□□□ 0.62
APOE-202ENST00000425718 OR2B8PP59922 312 aa18.94■□□□□ 0.62
APOE-202ENST00000425718 AARDQ4LEZ3 155 aa18.94■□□□□ 0.62
APOE-202ENST00000425718 OR52B4Q8NGK2 314 aa18.94■□□□□ 0.62
APOE-202ENST00000425718 WFDC12Q8WWY7 111 aa18.94■□□□□ 0.62
APOE-202ENST00000425718 SEC22CQ9BRL7 303 aa18.94■□□□□ 0.62
APOE-202ENST00000425718 NSG2Q9Y328 171 aa18.94■□□□□ 0.62
APOE-202ENST00000425718 A0A0B4J293 547 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 TEX50A0A1B0GTY4 177 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 IFNA17P01571 189 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 IGHG4P01861 327 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 HOXB5P09067 269 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 FOXE3Q13461 319 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 C3orf56Q8N813 242 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 OR5AU1Q8NGC0 362 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 FAM103A1Q9BTL3 118 aaKnown RBP18.93■□□□□ 0.62
APOE-202ENST00000425718 ENY2Q9NPA8 101 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 NDUFA4L2Q9NRX3 87 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 LINC00527Q9UJ94 153 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 FBXO7Q9Y3I1 522 aa18.93■□□□□ 0.62
APOE-202ENST00000425718 WSB1Q9Y6I7 421 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms