RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SLC25A24Q6NUK1 477 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 SPSB3Q6PJ21 355 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 PUSL1Q8N0Z8 303 aaKnown RBP9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 VN1R17PQ8TDU5 208 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 FANCD2OSQ96PS1 177 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 GFI1Q99684 422 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 DAZ1Q9NQZ3 744 aaKnown RBP9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 BET1LQ9NYM9 111 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TAS2R8Q9NYW2 309 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 DMRT1Q9Y5R6 373 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MPTX1A8MV57 137 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 HPRT1P00492 218 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 NQO2P16083 231 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 ERVK-16P61578 105 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 FABP5Q01469 135 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 OGFRL1Q5TC84 451 aaPredicted RBP9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 SPAG16Q8N0X2 631 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 DMBX1Q8NFW5 382 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 GATAD1Q8WUU5 269 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 BSCL2Q96G97 398 aaPredicted RBP9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 C5orf30Q96GV9 206 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 CCDC140Q96MF4 163 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 ATP6V0BQ99437 205 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 RARRES2Q99969 163 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 C20orf24Q9BUV8 137 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 CSTL1Q9H114 145 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 UBQLN2Q9UHD9 624 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 BLOC1S6Q9UL45 172 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 SELENOKQ9Y6D0 94 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TNCP24821 2201 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 DNAH7Q8WXX0 4024 aa9.14□□□□□ -0.95
HLA-DQB3-203ENST00000425319 IGLV11-55A0A075B6I3 123 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 K7EMT4 169 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TGOLN2O43493 480 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 MRPS14O60783 128 aaKnown RBP9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 REG1AP05451 166 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 CD5P06127 495 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 EIF4EP06730 217 aaKnown RBP9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 AREGP15514 252 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TAS2R31P59538 309 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 RPL30P62888 115 aaKnown RBP9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 IRF3Q14653 427 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 RBMS2Q15434 407 aaKnown RBP9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 MSMO1Q15800 293 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 KLK9Q2XQG4 91 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 PRSS48Q7RTY5 328 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TSPAN14Q8NG11 270 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 C11orf45Q8TAV5 145 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 ANXA10Q9UJ72 324 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 KLK9Q9UKQ9 250 aa9.13□□□□□ -0.95
HLA-DQB3-203ENST00000425319 NDUFA4O00483 81 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 RBFOX2O43251 390 aaKnown RBP eCLIP9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 SNAPC5O75971 98 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TRAPPC2P0DI81 140 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TRAPPC2BP0DI82 140 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 EDN2P20800 178 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 ADMP35318 185 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 RELQ04864 619 aaPredicted RBP9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 NR2C2APQ86WQ0 139 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 ZNF502Q8TBZ5 544 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 C2CD4CQ8TF44 421 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 SECTM1Q8WVN6 248 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TMEM56Q96MV1 263 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 DUSP21Q9H596 190 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 MAP6D1Q9H9H5 199 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 FKBP11Q9NYL4 201 aa9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 DYNC2H1Q8NCM8 4307 aaKnown RBP9.12□□□□□ -0.95
HLA-DQB3-203ENST00000425319 IGHV3-35A0A0C4DH35 117 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TRDV1A0A1B0GX56 115 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 MFSD2BA6NFX1 497 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 NUPL2O15504 423 aaKnown RBP9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 FGF2P09038 288 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 OR13C7P0DN81 318 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 RPA2P15927 270 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 OR2B8PP59922 312 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TIMM50Q3ZCQ8 353 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 Q56UQ5 140 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 UNQ9165/PRO28630Q6UXU0 137 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 ZNF367Q7RTV3 350 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TPRA1Q86W33 373 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 OR1L8Q8NGR8 309 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 OR5B3Q8NH48 314 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 QTRT1Q9BXR0 403 aaKnown RBP9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 ZNF436Q9C0F3 470 aaPredicted RBP9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 SLC5A7Q9GZV3 580 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 VCX3BQ9H321 246 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 FBXL17Q9UF56 701 aa9.11□□□□□ -0.95
HLA-DQB3-203ENST00000425319 OR2T8A6NH00 312 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 E7EUB6 86 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 UPK2O00526 184 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TNFSF12O43508 249 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 YIF1AO95070 293 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 S100GP29377 79 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 FCGR2CP31995 323 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 OR10A3P58181 314 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 RPP25LQ8N5L8 163 aaKnown RBP9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 UBAC2Q8NBM4 344 aa9.1□□□□□ -0.95
HLA-DQB3-203ENST00000425319 TMEM190Q8WZ59 177 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms